Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 pRNA.5-201ENST00000612139 90 ntBASIC19.92■□□□□ 0.78
CBX1P83916 pRNA.11-201ENST00000618423 90 ntBASIC19.92■□□□□ 0.78
CBX1P83916 pRNA.13-201ENST00000619112 90 ntBASIC19.92■□□□□ 0.78
CBX1P83916 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.92■□□□□ 0.78
CBX1P83916 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CBX1P83916 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBX1P83916 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CBX1P83916 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.92■□□□□ 0.78
CBX1P83916 PP12613-201ENST00000424958 2230 ntBASIC19.92■□□□□ 0.78
CBX1P83916 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.92■□□□□ 0.78
CBX1P83916 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBX1P83916 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CBX1P83916 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CBX1P83916 CROCCP2-202ENST00000412962 2773 ntBASIC19.92■□□□□ 0.78
CBX1P83916 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBX1P83916 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CBX1P83916 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
CBX1P83916 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CBX1P83916 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBX1P83916 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBX1P83916 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBX1P83916 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CBX1P83916 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBX1P83916 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CBX1P83916 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBX1P83916 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.91■□□□□ 0.78
CBX1P83916 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBX1P83916 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBX1P83916 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
CBX1P83916 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.91■□□□□ 0.78
CBX1P83916 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBX1P83916 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.91■□□□□ 0.78
CBX1P83916 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.91■□□□□ 0.78
CBX1P83916 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBX1P83916 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBX1P83916 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.91■□□□□ 0.78
CBX1P83916 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.91■□□□□ 0.78
CBX1P83916 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CBX1P83916 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CBX1P83916 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.91■□□□□ 0.78
CBX1P83916 CROCCP1-201ENST00000426910 5675 ntBASIC19.91■□□□□ 0.78
CBX1P83916 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.91■□□□□ 0.78
CBX1P83916 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBX1P83916 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CBX1P83916 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CBX1P83916 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CBX1P83916 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBX1P83916 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.9■□□□□ 0.78
CBX1P83916 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.9■□□□□ 0.78
CBX1P83916 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.9■□□□□ 0.78
CBX1P83916 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBX1P83916 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBX1P83916 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CBX1P83916 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBX1P83916 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.9■□□□□ 0.78
CBX1P83916 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.9■□□□□ 0.78
CBX1P83916 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CBX1P83916 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.9■□□□□ 0.78
CBX1P83916 KRT8P36-201ENST00000489121 1440 ntBASIC19.9■□□□□ 0.78
CBX1P83916 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.9■□□□□ 0.78
CBX1P83916 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBX1P83916 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CBX1P83916 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBX1P83916 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBX1P83916 AL162741.1-201ENST00000565563 1558 ntBASIC19.9■□□□□ 0.78
CBX1P83916 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CBX1P83916 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBX1P83916 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CBX1P83916 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CBX1P83916 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CBX1P83916 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
CBX1P83916 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CBX1P83916 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CBX1P83916 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CBX1P83916 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CBX1P83916 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CBX1P83916 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CBX1P83916 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CBX1P83916 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CBX1P83916 PCDHA1-201ENST00000378133 2726 ntBASIC19.89■□□□□ 0.77
CBX1P83916 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CBX1P83916 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.89■□□□□ 0.77
CBX1P83916 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CBX1P83916 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.89■□□□□ 0.77
CBX1P83916 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.89■□□□□ 0.77
CBX1P83916 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CBX1P83916 AP004607.4-201ENST00000530158 1459 ntBASIC19.89■□□□□ 0.77
CBX1P83916 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CBX1P83916 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CBX1P83916 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.89■□□□□ 0.77
CBX1P83916 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.89■□□□□ 0.77
CBX1P83916 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CBX1P83916 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.89■□□□□ 0.77
CBX1P83916 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CBX1P83916 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CBX1P83916 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC19.89■□□□□ 0.77
CBX1P83916 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.89■□□□□ 0.77
CBX1P83916 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CBX1P83916 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CBX1P83916 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms