Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ACTA1P68133 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ACTA1P68133 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ACTA1P68133 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ACTA1P68133 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.95■□□□□ 0.3
ACTA1P68133 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ACTA1P68133 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
ACTA1P68133 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.95■□□□□ 0.3
ACTA1P68133 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
ACTA1P68133 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.95■□□□□ 0.3
ACTA1P68133 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.95■□□□□ 0.3
ACTA1P68133 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.95■□□□□ 0.3
ACTA1P68133 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.95■□□□□ 0.3
ACTA1P68133 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.95■□□□□ 0.3
ACTA1P68133 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
ACTA1P68133 AC080038.1-201ENST00000611274 1154 ntBASIC16.95■□□□□ 0.3
ACTA1P68133 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ACTA1P68133 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.95■□□□□ 0.3
ACTA1P68133 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ACTA1P68133 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.95■□□□□ 0.3
ACTA1P68133 HTR7P1-202ENST00000624664 4411 ntBASIC16.95■□□□□ 0.3
ACTA1P68133 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
ACTA1P68133 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ACTA1P68133 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ACTA1P68133 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ACTA1P68133 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ACTA1P68133 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ACTA1P68133 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ACTA1P68133 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTA1P68133 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTA1P68133 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTA1P68133 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTA1P68133 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTA1P68133 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.94■□□□□ 0.3
ACTA1P68133 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTA1P68133 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.94■□□□□ 0.3
ACTA1P68133 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTA1P68133 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ACTA1P68133 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ACTA1P68133 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.94■□□□□ 0.3
ACTA1P68133 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ACTA1P68133 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.94■□□□□ 0.3
ACTA1P68133 TSPY21P-201ENST00000433481 731 ntBASIC16.94■□□□□ 0.3
ACTA1P68133 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.94■□□□□ 0.3
ACTA1P68133 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.94■□□□□ 0.3
ACTA1P68133 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.94■□□□□ 0.3
ACTA1P68133 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.94■□□□□ 0.3
ACTA1P68133 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.94■□□□□ 0.3
ACTA1P68133 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.94■□□□□ 0.3
ACTA1P68133 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
ACTA1P68133 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTA1P68133 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ACTA1P68133 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.94■□□□□ 0.3
ACTA1P68133 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
ACTA1P68133 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTA1P68133 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ACTA1P68133 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ACTA1P68133 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTA1P68133 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ACTA1P68133 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTA1P68133 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ACTA1P68133 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.93■□□□□ 0.3
ACTA1P68133 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ACTA1P68133 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ACTA1P68133 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.93■□□□□ 0.3
ACTA1P68133 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.93■□□□□ 0.3
ACTA1P68133 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.93■□□□□ 0.3
ACTA1P68133 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.93■□□□□ 0.3
ACTA1P68133 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.93■□□□□ 0.3
ACTA1P68133 NOC2LP2-201ENST00000407594 1944 ntBASIC16.93■□□□□ 0.3
ACTA1P68133 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ACTA1P68133 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ACTA1P68133 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ACTA1P68133 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
ACTA1P68133 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.93■□□□□ 0.3
ACTA1P68133 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.93■□□□□ 0.3
ACTA1P68133 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ACTA1P68133 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ACTA1P68133 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ACTA1P68133 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ACTA1P68133 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ACTA1P68133 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.92■□□□□ 0.3
ACTA1P68133 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ACTA1P68133 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.92■□□□□ 0.3
ACTA1P68133 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.92■□□□□ 0.3
ACTA1P68133 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ACTA1P68133 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ACTA1P68133 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ACTA1P68133 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ACTA1P68133 AC073592.3-201ENST00000625118 1834 ntBASIC16.92■□□□□ 0.3
ACTA1P68133 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ACTA1P68133 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ACTA1P68133 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ACTA1P68133 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.92■□□□□ 0.3
ACTA1P68133 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ACTA1P68133 DUSP5P2-201ENST00000426873 1033 ntBASIC16.92■□□□□ 0.3
ACTA1P68133 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.92■□□□□ 0.3
ACTA1P68133 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.92■□□□□ 0.3
ACTA1P68133 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.92■□□□□ 0.3
ACTA1P68133 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms