Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
DEFA3P59666 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DEFA3P59666 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DEFA3P59666 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DEFA3P59666 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.7■□□□□ 0.26
DEFA3P59666 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
DEFA3P59666 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.69■□□□□ 0.26
DEFA3P59666 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DEFA3P59666 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
DEFA3P59666 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DEFA3P59666 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
DEFA3P59666 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DEFA3P59666 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.69■□□□□ 0.26
DEFA3P59666 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.69■□□□□ 0.26
DEFA3P59666 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DEFA3P59666 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DEFA3P59666 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DEFA3P59666 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
DEFA3P59666 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
DEFA3P59666 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DEFA3P59666 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DEFA3P59666 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
DEFA3P59666 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
DEFA3P59666 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC16.69■□□□□ 0.26
DEFA3P59666 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DEFA3P59666 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.69■□□□□ 0.26
DEFA3P59666 AD000864.1-201ENST00000624076 2295 ntBASIC16.69■□□□□ 0.26
DEFA3P59666 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
DEFA3P59666 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
DEFA3P59666 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DEFA3P59666 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DEFA3P59666 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DEFA3P59666 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
DEFA3P59666 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DEFA3P59666 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
DEFA3P59666 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DEFA3P59666 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.69■□□□□ 0.26
DEFA3P59666 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DEFA3P59666 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
DEFA3P59666 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
DEFA3P59666 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
DEFA3P59666 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.69■□□□□ 0.26
DEFA3P59666 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.69■□□□□ 0.26
DEFA3P59666 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
DEFA3P59666 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.68■□□□□ 0.26
DEFA3P59666 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.68■□□□□ 0.26
DEFA3P59666 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
DEFA3P59666 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DEFA3P59666 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
DEFA3P59666 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DEFA3P59666 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
DEFA3P59666 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
DEFA3P59666 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DEFA3P59666 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.68■□□□□ 0.26
DEFA3P59666 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
DEFA3P59666 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
DEFA3P59666 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
DEFA3P59666 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
DEFA3P59666 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DEFA3P59666 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC16.68■□□□□ 0.26
DEFA3P59666 AC103834.1-201ENST00000520383 144 ntBASIC16.68■□□□□ 0.26
DEFA3P59666 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
DEFA3P59666 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.68■□□□□ 0.26
DEFA3P59666 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC16.68■□□□□ 0.26
DEFA3P59666 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DEFA3P59666 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
DEFA3P59666 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
DEFA3P59666 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DEFA3P59666 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
DEFA3P59666 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
DEFA3P59666 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
DEFA3P59666 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DEFA3P59666 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.68■□□□□ 0.26
DEFA3P59666 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.68■□□□□ 0.26
DEFA3P59666 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.68■□□□□ 0.26
DEFA3P59666 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DEFA3P59666 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DEFA3P59666 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DEFA3P59666 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DEFA3P59666 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DEFA3P59666 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DEFA3P59666 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.67■□□□□ 0.26
DEFA3P59666 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
DEFA3P59666 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DEFA3P59666 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DEFA3P59666 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.67■□□□□ 0.26
DEFA3P59666 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DEFA3P59666 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
DEFA3P59666 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DEFA3P59666 SLC25A6P5-201ENST00000435663 894 ntBASIC16.67■□□□□ 0.26
DEFA3P59666 SLC47A1P1-202ENST00000449666 945 ntBASIC16.67■□□□□ 0.26
DEFA3P59666 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.67■□□□□ 0.26
DEFA3P59666 KRT125P-201ENST00000546827 989 ntBASIC16.67■□□□□ 0.26
DEFA3P59666 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.67■□□□□ 0.26
DEFA3P59666 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.67■□□□□ 0.26
DEFA3P59666 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC16.67■□□□□ 0.26
DEFA3P59666 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC16.67■□□□□ 0.26
DEFA3P59666 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
DEFA3P59666 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.67■□□□□ 0.26
DEFA3P59666 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms