Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.43■□□□□ 0.7
CDH4P55283 AC008622.2-201ENST00000617006 1229 ntBASIC19.43■□□□□ 0.7
CDH4P55283 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
CDH4P55283 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH4P55283 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CDH4P55283 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH4P55283 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH4P55283 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.43■□□□□ 0.7
CDH4P55283 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CDH4P55283 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH4P55283 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH4P55283 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.43■□□□□ 0.7
CDH4P55283 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH4P55283 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDH4P55283 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH4P55283 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.42■□□□□ 0.7
CDH4P55283 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH4P55283 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CDH4P55283 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CDH4P55283 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.42■□□□□ 0.7
CDH4P55283 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.42■□□□□ 0.7
CDH4P55283 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDH4P55283 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CDH4P55283 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH4P55283 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDH4P55283 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.42■□□□□ 0.7
CDH4P55283 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH4P55283 AC005521.1-201ENST00000393351 872 ntBASIC19.42■□□□□ 0.7
CDH4P55283 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDH4P55283 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.42■□□□□ 0.7
CDH4P55283 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CDH4P55283 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.42■□□□□ 0.7
CDH4P55283 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH4P55283 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CDH4P55283 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.42■□□□□ 0.7
CDH4P55283 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH4P55283 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.42■□□□□ 0.7
CDH4P55283 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH4P55283 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH4P55283 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH4P55283 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.41■□□□□ 0.7
CDH4P55283 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH4P55283 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH4P55283 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH4P55283 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH4P55283 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH4P55283 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH4P55283 TERF1P1-201ENST00000311003 1181 ntBASIC19.41■□□□□ 0.7
CDH4P55283 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH4P55283 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.41■□□□□ 0.7
CDH4P55283 LIN28AP1-201ENST00000429574 405 ntBASIC19.41■□□□□ 0.7
CDH4P55283 AL512604.3-201ENST00000569583 964 ntBASIC19.41■□□□□ 0.7
CDH4P55283 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH4P55283 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH4P55283 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
CDH4P55283 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.41■□□□□ 0.7
CDH4P55283 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH4P55283 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH4P55283 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH4P55283 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH4P55283 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.4■□□□□ 0.7
CDH4P55283 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH4P55283 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH4P55283 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.4■□□□□ 0.7
CDH4P55283 RCN1P1-201ENST00000400413 996 ntBASIC19.4■□□□□ 0.7
CDH4P55283 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.4■□□□□ 0.7
CDH4P55283 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.4■□□□□ 0.7
CDH4P55283 AC010203.1-204ENST00000548782 407 ntBASIC19.4■□□□□ 0.7
CDH4P55283 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CDH4P55283 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.4■□□□□ 0.7
CDH4P55283 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDH4P55283 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH4P55283 AC073508.3-201ENST00000619697 1419 ntBASIC19.4■□□□□ 0.7
CDH4P55283 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH4P55283 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDH4P55283 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH4P55283 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CDH4P55283 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CDH4P55283 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.39■□□□□ 0.7
CDH4P55283 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.39■□□□□ 0.7
CDH4P55283 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
CDH4P55283 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.39■□□□□ 0.7
CDH4P55283 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
CDH4P55283 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.39■□□□□ 0.69
CDH4P55283 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH4P55283 AL161938.1-201ENST00000569833 2180 ntBASIC19.39■□□□□ 0.69
CDH4P55283 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH4P55283 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH4P55283 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH4P55283 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CDH4P55283 FAM210CP-201ENST00000445714 574 ntBASIC19.39■□□□□ 0.69
CDH4P55283 ATP5G1P1-201ENST00000448724 379 ntBASIC19.39■□□□□ 0.69
CDH4P55283 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.39■□□□□ 0.69
CDH4P55283 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.39■□□□□ 0.69
CDH4P55283 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDH4P55283 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CDH4P55283 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.39■□□□□ 0.69
CDH4P55283 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.39■□□□□ 0.69
CDH4P55283 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDH4P55283 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms