Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
PSMD4P55036 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PSMD4P55036 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PSMD4P55036 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PSMD4P55036 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.69■□□□□ 0.42
PSMD4P55036 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PSMD4P55036 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.69■□□□□ 0.42
PSMD4P55036 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PSMD4P55036 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PSMD4P55036 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PSMD4P55036 AC004951.3-201ENST00000418645 1148 ntBASIC17.69■□□□□ 0.42
PSMD4P55036 Z85996.1-201ENST00000494644 937 ntBASIC17.69■□□□□ 0.42
PSMD4P55036 AC008550.1-201ENST00000511500 884 ntBASIC17.69■□□□□ 0.42
PSMD4P55036 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.69■□□□□ 0.42
PSMD4P55036 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PSMD4P55036 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.69■□□□□ 0.42
PSMD4P55036 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PSMD4P55036 FSCN1P1-201ENST00000568912 1481 ntBASIC17.69■□□□□ 0.42
PSMD4P55036 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PSMD4P55036 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PSMD4P55036 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PSMD4P55036 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PSMD4P55036 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.68■□□□□ 0.42
PSMD4P55036 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.68■□□□□ 0.42
PSMD4P55036 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PSMD4P55036 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PSMD4P55036 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PSMD4P55036 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PSMD4P55036 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PSMD4P55036 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PSMD4P55036 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PSMD4P55036 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.68■□□□□ 0.42
PSMD4P55036 FAM197Y1-201ENST00000421178 764 ntBASIC17.68■□□□□ 0.42
PSMD4P55036 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.68■□□□□ 0.42
PSMD4P55036 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.68■□□□□ 0.42
PSMD4P55036 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PSMD4P55036 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PSMD4P55036 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.68■□□□□ 0.42
PSMD4P55036 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.68■□□□□ 0.42
PSMD4P55036 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PSMD4P55036 AL049637.2-201ENST00000641778 930 ntBASIC17.68■□□□□ 0.42
PSMD4P55036 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PSMD4P55036 AC087289.5-201ENST00000586076 3175 ntBASIC17.68■□□□□ 0.42
PSMD4P55036 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PSMD4P55036 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.68■□□□□ 0.42
PSMD4P55036 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PSMD4P55036 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PSMD4P55036 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PSMD4P55036 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PSMD4P55036 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PSMD4P55036 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PSMD4P55036 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PSMD4P55036 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PSMD4P55036 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PSMD4P55036 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.67■□□□□ 0.42
PSMD4P55036 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PSMD4P55036 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PSMD4P55036 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PSMD4P55036 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
PSMD4P55036 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PSMD4P55036 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PSMD4P55036 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PSMD4P55036 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.67■□□□□ 0.42
PSMD4P55036 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.67■□□□□ 0.42
PSMD4P55036 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.67■□□□□ 0.42
PSMD4P55036 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.67■□□□□ 0.42
PSMD4P55036 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PSMD4P55036 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PSMD4P55036 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PSMD4P55036 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.67■□□□□ 0.42
PSMD4P55036 FP475955.4-201ENST00000623131 1990 ntBASIC17.67■□□□□ 0.42
PSMD4P55036 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
PSMD4P55036 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PSMD4P55036 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PSMD4P55036 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
PSMD4P55036 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
PSMD4P55036 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PSMD4P55036 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PSMD4P55036 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
PSMD4P55036 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.67■□□□□ 0.42
PSMD4P55036 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PSMD4P55036 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PSMD4P55036 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PSMD4P55036 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
PSMD4P55036 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PSMD4P55036 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PSMD4P55036 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PSMD4P55036 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PSMD4P55036 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PSMD4P55036 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PSMD4P55036 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PSMD4P55036 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
PSMD4P55036 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PSMD4P55036 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PSMD4P55036 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.66■□□□□ 0.42
PSMD4P55036 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PSMD4P55036 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PSMD4P55036 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.66■□□□□ 0.42
PSMD4P55036 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.66■□□□□ 0.42
PSMD4P55036 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms