Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.66■□□□□ 0.58
GTF2A1P52655 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
GTF2A1P52655 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A1P52655 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.66■□□□□ 0.58
GTF2A1P52655 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A1P52655 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A1P52655 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.66■□□□□ 0.58
GTF2A1P52655 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.66■□□□□ 0.58
GTF2A1P52655 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.66■□□□□ 0.58
GTF2A1P52655 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.66■□□□□ 0.58
GTF2A1P52655 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A1P52655 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A1P52655 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A1P52655 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.66■□□□□ 0.58
GTF2A1P52655 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A1P52655 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
GTF2A1P52655 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
GTF2A1P52655 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
GTF2A1P52655 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.66■□□□□ 0.58
GTF2A1P52655 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
GTF2A1P52655 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.66■□□□□ 0.58
GTF2A1P52655 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A1P52655 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A1P52655 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A1P52655 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A1P52655 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A1P52655 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A1P52655 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
GTF2A1P52655 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.65■□□□□ 0.58
GTF2A1P52655 AC009299.2-201ENST00000482477 511 ntBASIC18.65■□□□□ 0.58
GTF2A1P52655 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
GTF2A1P52655 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A1P52655 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A1P52655 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A1P52655 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A1P52655 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
GTF2A1P52655 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
GTF2A1P52655 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A1P52655 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A1P52655 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.65■□□□□ 0.58
GTF2A1P52655 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A1P52655 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A1P52655 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
GTF2A1P52655 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A1P52655 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.64■□□□□ 0.58
GTF2A1P52655 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
GTF2A1P52655 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.64■□□□□ 0.58
GTF2A1P52655 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.58
GTF2A1P52655 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
GTF2A1P52655 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
GTF2A1P52655 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GTF2A1P52655 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GTF2A1P52655 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
GTF2A1P52655 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GTF2A1P52655 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.64■□□□□ 0.57
GTF2A1P52655 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.64■□□□□ 0.57
GTF2A1P52655 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GTF2A1P52655 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GTF2A1P52655 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GTF2A1P52655 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.64■□□□□ 0.57
GTF2A1P52655 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.64■□□□□ 0.57
GTF2A1P52655 RARRES2P1-201ENST00000474487 481 ntBASIC18.64■□□□□ 0.57
GTF2A1P52655 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.64■□□□□ 0.57
GTF2A1P52655 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.64■□□□□ 0.57
GTF2A1P52655 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GTF2A1P52655 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
GTF2A1P52655 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
GTF2A1P52655 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GTF2A1P52655 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.64■□□□□ 0.57
GTF2A1P52655 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
GTF2A1P52655 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.64■□□□□ 0.57
GTF2A1P52655 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GTF2A1P52655 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.64■□□□□ 0.57
GTF2A1P52655 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GTF2A1P52655 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
GTF2A1P52655 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GTF2A1P52655 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2A1P52655 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2A1P52655 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2A1P52655 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.63■□□□□ 0.57
GTF2A1P52655 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2A1P52655 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.63■□□□□ 0.57
GTF2A1P52655 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2A1P52655 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2A1P52655 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.63■□□□□ 0.57
GTF2A1P52655 AL662844.4-201ENST00000606367 2838 ntBASIC18.63■□□□□ 0.57
GTF2A1P52655 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
GTF2A1P52655 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC18.63■□□□□ 0.57
GTF2A1P52655 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2A1P52655 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2A1P52655 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
GTF2A1P52655 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2A1P52655 AC108860.2-201ENST00000562760 2183 ntBASIC18.63■□□□□ 0.57
GTF2A1P52655 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2A1P52655 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2A1P52655 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2A1P52655 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.63■□□□□ 0.57
GTF2A1P52655 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.63■□□□□ 0.57
GTF2A1P52655 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2A1P52655 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms