Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.53■□□□□ 0.88
PDE6CP51160 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.53■□□□□ 0.88
PDE6CP51160 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
PDE6CP51160 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.53■□□□□ 0.88
PDE6CP51160 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PDE6CP51160 AL049812.1-201ENST00000432563 2267 ntBASIC20.53■□□□□ 0.88
PDE6CP51160 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PDE6CP51160 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PDE6CP51160 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6CP51160 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6CP51160 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
PDE6CP51160 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PDE6CP51160 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PDE6CP51160 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.53■□□□□ 0.88
PDE6CP51160 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6CP51160 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDE6CP51160 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDE6CP51160 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDE6CP51160 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.52■□□□□ 0.88
PDE6CP51160 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PDE6CP51160 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
PDE6CP51160 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.52■□□□□ 0.88
PDE6CP51160 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.52■□□□□ 0.88
PDE6CP51160 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.52■□□□□ 0.88
PDE6CP51160 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.52■□□□□ 0.88
PDE6CP51160 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.52■□□□□ 0.88
PDE6CP51160 AL160286.2-201ENST00000567150 934 ntBASIC20.52■□□□□ 0.88
PDE6CP51160 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
PDE6CP51160 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDE6CP51160 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDE6CP51160 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PDE6CP51160 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PDE6CP51160 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.52■□□□□ 0.87
PDE6CP51160 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
PDE6CP51160 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
PDE6CP51160 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
PDE6CP51160 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.52■□□□□ 0.87
PDE6CP51160 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE6CP51160 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE6CP51160 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PDE6CP51160 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.51■□□□□ 0.87
PDE6CP51160 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.51■□□□□ 0.87
PDE6CP51160 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
PDE6CP51160 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.51■□□□□ 0.87
PDE6CP51160 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE6CP51160 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE6CP51160 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE6CP51160 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDE6CP51160 ECEL1P3-201ENST00000427961 737 ntBASIC20.51■□□□□ 0.87
PDE6CP51160 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.51■□□□□ 0.87
PDE6CP51160 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.51■□□□□ 0.87
PDE6CP51160 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PDE6CP51160 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.51■□□□□ 0.87
PDE6CP51160 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.51■□□□□ 0.87
PDE6CP51160 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE6CP51160 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE6CP51160 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.51■□□□□ 0.87
PDE6CP51160 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.51■□□□□ 0.87
PDE6CP51160 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE6CP51160 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.51■□□□□ 0.87
PDE6CP51160 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDE6CP51160 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
PDE6CP51160 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE6CP51160 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDE6CP51160 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
PDE6CP51160 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.5■□□□□ 0.87
PDE6CP51160 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6CP51160 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PDE6CP51160 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6CP51160 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6CP51160 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.5■□□□□ 0.87
PDE6CP51160 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PDE6CP51160 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.5■□□□□ 0.87
PDE6CP51160 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6CP51160 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PDE6CP51160 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PDE6CP51160 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6CP51160 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.5■□□□□ 0.87
PDE6CP51160 AC087499.1-201ENST00000418141 1075 ntBASIC20.5■□□□□ 0.87
PDE6CP51160 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.5■□□□□ 0.87
PDE6CP51160 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6CP51160 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6CP51160 CR392000.1-201ENST00000624770 1228 ntBASIC20.5■□□□□ 0.87
PDE6CP51160 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6CP51160 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6CP51160 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.5■□□□□ 0.87
PDE6CP51160 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6CP51160 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6CP51160 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6CP51160 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE6CP51160 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDE6CP51160 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE6CP51160 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDE6CP51160 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE6CP51160 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE6CP51160 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDE6CP51160 IRX1P1-201ENST00000438849 1838 ntBASIC20.49■□□□□ 0.87
PDE6CP51160 UNC93B2-201ENST00000285383 730 ntBASIC20.49■□□□□ 0.87
PDE6CP51160 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PDE6CP51160 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms