Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.35■□□□□ 0.53
SLC6A12P48065 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SLC6A12P48065 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A12P48065 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC6A12P48065 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A12P48065 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A12P48065 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A12P48065 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SLC6A12P48065 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A12P48065 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.35■□□□□ 0.53
SLC6A12P48065 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.35■□□□□ 0.53
SLC6A12P48065 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.35■□□□□ 0.53
SLC6A12P48065 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.35■□□□□ 0.53
SLC6A12P48065 AP001412.1-201ENST00000608405 714 ntBASIC18.35■□□□□ 0.53
SLC6A12P48065 TMEM191A-211ENST00000637163 1067 ntBASIC18.35■□□□□ 0.53
SLC6A12P48065 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A12P48065 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A12P48065 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A12P48065 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC6A12P48065 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A12P48065 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC6A12P48065 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A12P48065 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A12P48065 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A12P48065 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A12P48065 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SLC6A12P48065 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC6A12P48065 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A12P48065 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A12P48065 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC6A12P48065 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SLC6A12P48065 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A12P48065 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A12P48065 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC6A12P48065 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.34■□□□□ 0.53
SLC6A12P48065 Z99916.2-201ENST00000604037 246 ntBASIC18.34■□□□□ 0.53
SLC6A12P48065 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC6A12P48065 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SLC6A12P48065 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A12P48065 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC6A12P48065 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A12P48065 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A12P48065 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A12P48065 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SLC6A12P48065 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC6A12P48065 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC6A12P48065 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SLC6A12P48065 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.33■□□□□ 0.53
SLC6A12P48065 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC6A12P48065 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SLC6A12P48065 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SLC6A12P48065 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SLC6A12P48065 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.33■□□□□ 0.53
SLC6A12P48065 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.33■□□□□ 0.53
SLC6A12P48065 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A12P48065 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A12P48065 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A12P48065 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SLC6A12P48065 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.33■□□□□ 0.52
SLC6A12P48065 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC6A12P48065 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.33■□□□□ 0.52
SLC6A12P48065 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A12P48065 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC6A12P48065 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC6A12P48065 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A12P48065 DGCR10-201ENST00000609839 495 ntBASIC18.33■□□□□ 0.52
SLC6A12P48065 HEIH-201ENST00000623091 1652 ntBASIC18.33■□□□□ 0.52
SLC6A12P48065 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A12P48065 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A12P48065 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A12P48065 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A12P48065 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A12P48065 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A12P48065 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A12P48065 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
SLC6A12P48065 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC6A12P48065 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC6A12P48065 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC6A12P48065 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC6A12P48065 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC6A12P48065 AC096733.2-201ENST00000609937 1394 ntBASIC18.32■□□□□ 0.52
SLC6A12P48065 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SLC6A12P48065 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC6A12P48065 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.32■□□□□ 0.52
SLC6A12P48065 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC6A12P48065 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC6A12P48065 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SLC6A12P48065 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC6A12P48065 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.32■□□□□ 0.52
SLC6A12P48065 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.32■□□□□ 0.52
SLC6A12P48065 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SLC6A12P48065 AC068587.9-201ENST00000641814 219 ntBASIC18.32■□□□□ 0.52
SLC6A12P48065 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.32■□□□□ 0.52
SLC6A12P48065 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC6A12P48065 KRT8P32-201ENST00000512863 1461 ntBASIC18.32■□□□□ 0.52
SLC6A12P48065 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SLC6A12P48065 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC6A12P48065 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC6A12P48065 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC6A12P48065 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms