Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNFSF9P41273 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TNFSF9P41273 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.57■□□□□ 0.88
TNFSF9P41273 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TNFSF9P41273 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.57■□□□□ 0.88
TNFSF9P41273 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.57■□□□□ 0.88
TNFSF9P41273 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.57■□□□□ 0.88
TNFSF9P41273 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.57■□□□□ 0.88
TNFSF9P41273 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNFSF9P41273 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.57■□□□□ 0.88
TNFSF9P41273 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TNFSF9P41273 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNFSF9P41273 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
TNFSF9P41273 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFSF9P41273 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFSF9P41273 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFSF9P41273 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.56■□□□□ 0.88
TNFSF9P41273 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.56■□□□□ 0.88
TNFSF9P41273 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFSF9P41273 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFSF9P41273 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFSF9P41273 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFSF9P41273 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFSF9P41273 HMGA1P5-201ENST00000412453 271 ntBASIC20.56■□□□□ 0.88
TNFSF9P41273 AL137013.1-201ENST00000432946 1228 ntBASIC20.56■□□□□ 0.88
TNFSF9P41273 FAM210CP-201ENST00000445714 574 ntBASIC20.56■□□□□ 0.88
TNFSF9P41273 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TNFSF9P41273 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.56■□□□□ 0.88
TNFSF9P41273 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFSF9P41273 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFSF9P41273 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TNFSF9P41273 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TNFSF9P41273 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.56■□□□□ 0.88
TNFSF9P41273 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFSF9P41273 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFSF9P41273 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFSF9P41273 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFSF9P41273 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFSF9P41273 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TNFSF9P41273 KRT8P3-201ENST00000519669 1449 ntBASIC20.55■□□□□ 0.88
TNFSF9P41273 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TNFSF9P41273 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFSF9P41273 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.55■□□□□ 0.88
TNFSF9P41273 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.55■□□□□ 0.88
TNFSF9P41273 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFSF9P41273 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFSF9P41273 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.55■□□□□ 0.88
TNFSF9P41273 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.55■□□□□ 0.88
TNFSF9P41273 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TNFSF9P41273 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TNFSF9P41273 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
TNFSF9P41273 GPAT2P1-201ENST00000444924 1672 ntBASIC20.54■□□□□ 0.88
TNFSF9P41273 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TNFSF9P41273 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFSF9P41273 KRT8P45-201ENST00000414328 1447 ntBASIC20.54■□□□□ 0.88
TNFSF9P41273 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TNFSF9P41273 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TNFSF9P41273 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TNFSF9P41273 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TNFSF9P41273 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFSF9P41273 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TNFSF9P41273 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TNFSF9P41273 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.54■□□□□ 0.88
TNFSF9P41273 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.54■□□□□ 0.88
TNFSF9P41273 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.54■□□□□ 0.88
TNFSF9P41273 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.54■□□□□ 0.88
TNFSF9P41273 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.54■□□□□ 0.88
TNFSF9P41273 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.54■□□□□ 0.88
TNFSF9P41273 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.54■□□□□ 0.88
TNFSF9P41273 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TNFSF9P41273 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFSF9P41273 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TNFSF9P41273 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFSF9P41273 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TNFSF9P41273 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFSF9P41273 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TNFSF9P41273 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.54■□□□□ 0.88
TNFSF9P41273 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFSF9P41273 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TNFSF9P41273 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF9P41273 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF9P41273 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF9P41273 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF9P41273 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.53■□□□□ 0.88
TNFSF9P41273 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF9P41273 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF9P41273 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF9P41273 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF9P41273 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF9P41273 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.53■□□□□ 0.88
TNFSF9P41273 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.53■□□□□ 0.88
TNFSF9P41273 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.53■□□□□ 0.88
TNFSF9P41273 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.53■□□□□ 0.88
TNFSF9P41273 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.53■□□□□ 0.88
TNFSF9P41273 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TNFSF9P41273 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TNFSF9P41273 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF9P41273 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
TNFSF9P41273 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.53■□□□□ 0.88
TNFSF9P41273 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms