Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.51■□□□□ 0.07
CEACAM3P40198 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.51■□□□□ 0.07
CEACAM3P40198 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CEACAM3P40198 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CEACAM3P40198 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CEACAM3P40198 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.51■□□□□ 0.07
CEACAM3P40198 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CEACAM3P40198 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.51■□□□□ 0.07
CEACAM3P40198 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CEACAM3P40198 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CEACAM3P40198 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CEACAM3P40198 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.51■□□□□ 0.07
CEACAM3P40198 TSPY7P-201ENST00000431358 1114 ntBASIC15.51■□□□□ 0.07
CEACAM3P40198 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.51■□□□□ 0.07
CEACAM3P40198 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.51■□□□□ 0.07
CEACAM3P40198 AC091390.4-202ENST00000476426 537 ntBASIC15.51■□□□□ 0.07
CEACAM3P40198 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.51■□□□□ 0.07
CEACAM3P40198 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.51■□□□□ 0.07
CEACAM3P40198 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.51■□□□□ 0.07
CEACAM3P40198 AC130371.2-201ENST00000619443 611 ntBASIC15.51■□□□□ 0.07
CEACAM3P40198 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.51■□□□□ 0.07
CEACAM3P40198 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CEACAM3P40198 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CEACAM3P40198 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC15.51■□□□□ 0.07
CEACAM3P40198 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
CEACAM3P40198 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.51■□□□□ 0.07
CEACAM3P40198 HTR7P1-202ENST00000624664 4411 ntBASIC15.51■□□□□ 0.07
CEACAM3P40198 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CEACAM3P40198 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CEACAM3P40198 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CEACAM3P40198 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CEACAM3P40198 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.51■□□□□ 0.07
CEACAM3P40198 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.51■□□□□ 0.07
CEACAM3P40198 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.51■□□□□ 0.07
CEACAM3P40198 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CEACAM3P40198 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CEACAM3P40198 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CEACAM3P40198 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CEACAM3P40198 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.5■□□□□ 0.07
CEACAM3P40198 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CEACAM3P40198 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15.5■□□□□ 0.07
CEACAM3P40198 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CEACAM3P40198 AC141586.3-201ENST00000562166 1838 ntBASIC15.5■□□□□ 0.07
CEACAM3P40198 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CEACAM3P40198 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.5■□□□□ 0.07
CEACAM3P40198 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CEACAM3P40198 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CEACAM3P40198 AC005332.7-201ENST00000614046 2005 ntBASIC15.5■□□□□ 0.07
CEACAM3P40198 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.5■□□□□ 0.07
CEACAM3P40198 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CEACAM3P40198 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CEACAM3P40198 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CEACAM3P40198 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CEACAM3P40198 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CEACAM3P40198 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CEACAM3P40198 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CEACAM3P40198 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CEACAM3P40198 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.5■□□□□ 0.07
CEACAM3P40198 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.5■□□□□ 0.07
CEACAM3P40198 AP000692.2-201ENST00000608391 879 ntBASIC15.5■□□□□ 0.07
CEACAM3P40198 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CEACAM3P40198 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CEACAM3P40198 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.5■□□□□ 0.07
CEACAM3P40198 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CEACAM3P40198 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CEACAM3P40198 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CEACAM3P40198 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CEACAM3P40198 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.5■□□□□ 0.07
CEACAM3P40198 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.5■□□□□ 0.07
CEACAM3P40198 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CEACAM3P40198 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CEACAM3P40198 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.5■□□□□ 0.07
CEACAM3P40198 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CEACAM3P40198 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CEACAM3P40198 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CEACAM3P40198 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CEACAM3P40198 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CEACAM3P40198 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CEACAM3P40198 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.49■□□□□ 0.07
CEACAM3P40198 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CEACAM3P40198 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CEACAM3P40198 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.49■□□□□ 0.07
CEACAM3P40198 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CEACAM3P40198 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
CEACAM3P40198 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CEACAM3P40198 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CEACAM3P40198 AC116562.4-201ENST00000641316 2276 ntBASIC15.49■□□□□ 0.07
CEACAM3P40198 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.49■□□□□ 0.07
CEACAM3P40198 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CEACAM3P40198 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CEACAM3P40198 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CEACAM3P40198 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CEACAM3P40198 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.49■□□□□ 0.07
CEACAM3P40198 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CEACAM3P40198 AC011506.1-201ENST00000474329 610 ntBASIC15.49■□□□□ 0.07
CEACAM3P40198 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.49■□□□□ 0.07
CEACAM3P40198 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.49■□□□□ 0.07
CEACAM3P40198 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.49■□□□□ 0.07
CEACAM3P40198 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.49■□□□□ 0.07
CEACAM3P40198 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms