Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
XPAP23025 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
XPAP23025 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.18■□□□□ 0.66
XPAP23025 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.18■□□□□ 0.66
XPAP23025 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
XPAP23025 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
XPAP23025 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
XPAP23025 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
XPAP23025 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
XPAP23025 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
XPAP23025 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
XPAP23025 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.18■□□□□ 0.66
XPAP23025 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
XPAP23025 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
XPAP23025 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.18■□□□□ 0.66
XPAP23025 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.18■□□□□ 0.66
XPAP23025 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
XPAP23025 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
XPAP23025 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
XPAP23025 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.17■□□□□ 0.66
XPAP23025 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.17■□□□□ 0.66
XPAP23025 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.17■□□□□ 0.66
XPAP23025 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
XPAP23025 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
XPAP23025 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
XPAP23025 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
XPAP23025 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
XPAP23025 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.17■□□□□ 0.66
XPAP23025 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.17■□□□□ 0.66
XPAP23025 LIN28AP1-201ENST00000429574 405 ntBASIC19.17■□□□□ 0.66
XPAP23025 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
XPAP23025 TSPY23P-201ENST00000440136 739 ntBASIC19.17■□□□□ 0.66
XPAP23025 ECEL1P2-202ENST00000465689 757 ntBASIC19.17■□□□□ 0.66
XPAP23025 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.17■□□□□ 0.66
XPAP23025 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
XPAP23025 KRT18P21-201ENST00000515767 1272 ntBASIC19.17■□□□□ 0.66
XPAP23025 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.17■□□□□ 0.66
XPAP23025 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
XPAP23025 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.17■□□□□ 0.66
XPAP23025 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
XPAP23025 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
XPAP23025 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.17■□□□□ 0.66
XPAP23025 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.17■□□□□ 0.66
XPAP23025 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.17■□□□□ 0.66
XPAP23025 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.17■□□□□ 0.66
XPAP23025 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
XPAP23025 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
XPAP23025 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
XPAP23025 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.16■□□□□ 0.66
XPAP23025 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
XPAP23025 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
XPAP23025 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
XPAP23025 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.16■□□□□ 0.66
XPAP23025 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.16■□□□□ 0.66
XPAP23025 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
XPAP23025 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.16■□□□□ 0.66
XPAP23025 ATP5G1P1-201ENST00000448724 379 ntBASIC19.16■□□□□ 0.66
XPAP23025 TSPY17P-201ENST00000450329 467 ntBASIC19.16■□□□□ 0.66
XPAP23025 CA15P1-201ENST00000481698 905 ntBASIC19.16■□□□□ 0.66
XPAP23025 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.16■□□□□ 0.66
XPAP23025 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.16■□□□□ 0.66
XPAP23025 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.16■□□□□ 0.66
XPAP23025 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.16■□□□□ 0.66
XPAP23025 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
XPAP23025 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
XPAP23025 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
XPAP23025 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
XPAP23025 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
XPAP23025 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
XPAP23025 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
XPAP23025 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.15■□□□□ 0.66
XPAP23025 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
XPAP23025 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
XPAP23025 HTR7P1-202ENST00000624664 4411 ntBASIC19.15■□□□□ 0.66
XPAP23025 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
XPAP23025 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
XPAP23025 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
XPAP23025 AL137013.1-201ENST00000432946 1228 ntBASIC19.15■□□□□ 0.66
XPAP23025 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.15■□□□□ 0.66
XPAP23025 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
XPAP23025 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.15■□□□□ 0.66
XPAP23025 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
XPAP23025 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
XPAP23025 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
XPAP23025 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
XPAP23025 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.15■□□□□ 0.66
XPAP23025 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
XPAP23025 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
XPAP23025 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
XPAP23025 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
XPAP23025 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
XPAP23025 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.15■□□□□ 0.66
XPAP23025 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
XPAP23025 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
XPAP23025 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
XPAP23025 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.14■□□□□ 0.66
XPAP23025 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
XPAP23025 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
XPAP23025 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
XPAP23025 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms