Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ERCC2P18074 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ERCC2P18074 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
ERCC2P18074 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.57■□□□□ 0.72
ERCC2P18074 AC093827.2-201ENST00000512654 315 ntBASIC19.57■□□□□ 0.72
ERCC2P18074 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.57■□□□□ 0.72
ERCC2P18074 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.57■□□□□ 0.72
ERCC2P18074 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.57■□□□□ 0.72
ERCC2P18074 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.57■□□□□ 0.72
ERCC2P18074 MIR4497-201ENST00000583208 89 ntBASIC19.57■□□□□ 0.72
ERCC2P18074 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.57■□□□□ 0.72
ERCC2P18074 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
ERCC2P18074 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
ERCC2P18074 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ERCC2P18074 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
ERCC2P18074 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
ERCC2P18074 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ERCC2P18074 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ERCC2P18074 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC2P18074 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC2P18074 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC2P18074 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC2P18074 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC2P18074 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC2P18074 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC2P18074 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
ERCC2P18074 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC2P18074 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.56■□□□□ 0.72
ERCC2P18074 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.56■□□□□ 0.72
ERCC2P18074 SLC25A1P4-201ENST00000567977 778 ntBASIC19.56■□□□□ 0.72
ERCC2P18074 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC2P18074 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.56■□□□□ 0.72
ERCC2P18074 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.56■□□□□ 0.72
ERCC2P18074 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.56■□□□□ 0.72
ERCC2P18074 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.56■□□□□ 0.72
ERCC2P18074 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.56■□□□□ 0.72
ERCC2P18074 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC2P18074 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.56■□□□□ 0.72
ERCC2P18074 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
ERCC2P18074 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.56■□□□□ 0.72
ERCC2P18074 AC096733.2-201ENST00000609937 1394 ntBASIC19.56■□□□□ 0.72
ERCC2P18074 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.56■□□□□ 0.72
ERCC2P18074 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC2P18074 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC2P18074 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC2P18074 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ERCC2P18074 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC2P18074 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.55■□□□□ 0.72
ERCC2P18074 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC2P18074 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.55■□□□□ 0.72
ERCC2P18074 AC097488.1-201ENST00000507834 756 ntBASIC19.55■□□□□ 0.72
ERCC2P18074 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.55■□□□□ 0.72
ERCC2P18074 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.55■□□□□ 0.72
ERCC2P18074 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
ERCC2P18074 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC2P18074 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC2P18074 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC2P18074 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ERCC2P18074 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC2P18074 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ERCC2P18074 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.55■□□□□ 0.72
ERCC2P18074 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC2P18074 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC2P18074 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC2P18074 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC2P18074 KRT17P2-201ENST00000300992 1314 ntBASIC19.54■□□□□ 0.72
ERCC2P18074 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.54■□□□□ 0.72
ERCC2P18074 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC2P18074 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC2P18074 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC2P18074 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC2P18074 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC2P18074 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC2P18074 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC2P18074 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ERCC2P18074 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.54■□□□□ 0.72
ERCC2P18074 RBM17P1-201ENST00000453646 1190 ntBASIC19.54■□□□□ 0.72
ERCC2P18074 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.54■□□□□ 0.72
ERCC2P18074 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.54■□□□□ 0.72
ERCC2P18074 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.54■□□□□ 0.72
ERCC2P18074 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.54■□□□□ 0.72
ERCC2P18074 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.54■□□□□ 0.72
ERCC2P18074 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.54■□□□□ 0.72
ERCC2P18074 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC2P18074 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC2P18074 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.54■□□□□ 0.72
ERCC2P18074 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.54■□□□□ 0.72
ERCC2P18074 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.54■□□□□ 0.72
ERCC2P18074 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC2P18074 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC2P18074 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC2P18074 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC2P18074 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.53■□□□□ 0.72
ERCC2P18074 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC2P18074 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC2P18074 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.53■□□□□ 0.72
ERCC2P18074 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
ERCC2P18074 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
ERCC2P18074 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC2P18074 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms