Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GAP43P17677 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
GAP43P17677 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GAP43P17677 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.98■□□□□ 0.95
GAP43P17677 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.97■□□□□ 0.95
GAP43P17677 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
GAP43P17677 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
GAP43P17677 KRT8P3-201ENST00000519669 1449 ntBASIC20.97■□□□□ 0.95
GAP43P17677 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GAP43P17677 AC006333.2-201ENST00000607957 2099 ntBASIC20.97■□□□□ 0.95
GAP43P17677 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GAP43P17677 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
GAP43P17677 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.97■□□□□ 0.95
GAP43P17677 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GAP43P17677 UNC93B2-201ENST00000285383 730 ntBASIC20.97■□□□□ 0.95
GAP43P17677 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
GAP43P17677 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
GAP43P17677 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.97■□□□□ 0.95
GAP43P17677 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GAP43P17677 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
GAP43P17677 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.97■□□□□ 0.95
GAP43P17677 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.97■□□□□ 0.95
GAP43P17677 AP005242.2-201ENST00000580065 1175 ntBASIC20.97■□□□□ 0.95
GAP43P17677 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
GAP43P17677 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GAP43P17677 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.97■□□□□ 0.95
GAP43P17677 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GAP43P17677 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GAP43P17677 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
GAP43P17677 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GAP43P17677 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GAP43P17677 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.96■□□□□ 0.95
GAP43P17677 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GAP43P17677 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GAP43P17677 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
GAP43P17677 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GAP43P17677 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.96■□□□□ 0.95
GAP43P17677 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
GAP43P17677 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GAP43P17677 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
GAP43P17677 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.96■□□□□ 0.95
GAP43P17677 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.96■□□□□ 0.95
GAP43P17677 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
GAP43P17677 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GAP43P17677 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GAP43P17677 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GAP43P17677 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GAP43P17677 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.96■□□□□ 0.95
GAP43P17677 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
GAP43P17677 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GAP43P17677 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.96■□□□□ 0.95
GAP43P17677 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.96■□□□□ 0.95
GAP43P17677 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
GAP43P17677 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
GAP43P17677 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GAP43P17677 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
GAP43P17677 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
GAP43P17677 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
GAP43P17677 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GAP43P17677 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.95■□□□□ 0.94
GAP43P17677 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GAP43P17677 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GAP43P17677 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
GAP43P17677 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.95■□□□□ 0.94
GAP43P17677 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
GAP43P17677 CRYGFP-201ENST00000418459 633 ntBASIC20.95■□□□□ 0.94
GAP43P17677 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.95■□□□□ 0.94
GAP43P17677 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.95■□□□□ 0.94
GAP43P17677 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.95■□□□□ 0.94
GAP43P17677 AC083906.6-201ENST00000641366 219 ntBASIC20.95■□□□□ 0.94
GAP43P17677 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.95■□□□□ 0.94
GAP43P17677 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GAP43P17677 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
GAP43P17677 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
GAP43P17677 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.95■□□□□ 0.94
GAP43P17677 TNXA-203ENST00000507684 2038 ntBASIC20.95■□□□□ 0.94
GAP43P17677 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
GAP43P17677 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GAP43P17677 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
GAP43P17677 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GAP43P17677 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
GAP43P17677 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GAP43P17677 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
GAP43P17677 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
GAP43P17677 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GAP43P17677 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.94■□□□□ 0.94
GAP43P17677 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.94■□□□□ 0.94
GAP43P17677 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GAP43P17677 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GAP43P17677 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
GAP43P17677 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.94■□□□□ 0.94
GAP43P17677 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GAP43P17677 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.94■□□□□ 0.94
GAP43P17677 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GAP43P17677 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GAP43P17677 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
GAP43P17677 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GAP43P17677 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.94■□□□□ 0.94
GAP43P17677 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
GAP43P17677 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms