Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.62■■□□□ 1.05
COL11A1P12107 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL11A1P12107 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.62■■□□□ 1.05
COL11A1P12107 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL11A1P12107 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL11A1P12107 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.62■■□□□ 1.05
COL11A1P12107 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL11A1P12107 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
COL11A1P12107 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL11A1P12107 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.62■■□□□ 1.05
COL11A1P12107 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL11A1P12107 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL11A1P12107 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.62■■□□□ 1.05
COL11A1P12107 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.62■■□□□ 1.05
COL11A1P12107 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.62■■□□□ 1.05
COL11A1P12107 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.62■■□□□ 1.05
COL11A1P12107 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.62■■□□□ 1.05
COL11A1P12107 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL11A1P12107 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
COL11A1P12107 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COL11A1P12107 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL11A1P12107 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.61■■□□□ 1.05
COL11A1P12107 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.61■■□□□ 1.05
COL11A1P12107 KRT126P-201ENST00000549467 1181 ntBASIC21.61■■□□□ 1.05
COL11A1P12107 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.61■■□□□ 1.05
COL11A1P12107 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.61■■□□□ 1.05
COL11A1P12107 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL11A1P12107 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL11A1P12107 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.6■■□□□ 1.05
COL11A1P12107 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
COL11A1P12107 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.6■■□□□ 1.05
COL11A1P12107 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
COL11A1P12107 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL11A1P12107 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.6■■□□□ 1.05
COL11A1P12107 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.6■■□□□ 1.05
COL11A1P12107 IFNL4P1-201ENST00000607083 540 ntBASIC21.6■■□□□ 1.05
COL11A1P12107 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.6■■□□□ 1.05
COL11A1P12107 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.6■■□□□ 1.05
COL11A1P12107 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL11A1P12107 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL11A1P12107 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL11A1P12107 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL11A1P12107 AL391807.1-203ENST00000604392 2365 ntBASIC21.6■■□□□ 1.05
COL11A1P12107 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.6■■□□□ 1.05
COL11A1P12107 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL11A1P12107 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL11A1P12107 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL11A1P12107 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.6■■□□□ 1.05
COL11A1P12107 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL11A1P12107 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
COL11A1P12107 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.6■■□□□ 1.05
COL11A1P12107 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL11A1P12107 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.6■■□□□ 1.05
COL11A1P12107 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.6■■□□□ 1.05
COL11A1P12107 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL11A1P12107 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL11A1P12107 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL11A1P12107 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.59■■□□□ 1.05
COL11A1P12107 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.59■■□□□ 1.05
COL11A1P12107 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.59■■□□□ 1.05
COL11A1P12107 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
COL11A1P12107 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.59■■□□□ 1.05
COL11A1P12107 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL11A1P12107 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL11A1P12107 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
COL11A1P12107 AL158211.5-201ENST00000623583 2518 ntBASIC21.59■■□□□ 1.05
COL11A1P12107 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.59■■□□□ 1.05
COL11A1P12107 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL11A1P12107 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.59■■□□□ 1.05
COL11A1P12107 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL11A1P12107 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL11A1P12107 HOXB1-202ENST00000577092 1414 ntBASIC21.59■■□□□ 1.05
COL11A1P12107 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL11A1P12107 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.59■■□□□ 1.05
COL11A1P12107 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.59■■□□□ 1.05
COL11A1P12107 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
COL11A1P12107 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.59■■□□□ 1.05
COL11A1P12107 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.59■■□□□ 1.05
COL11A1P12107 TPSP2-201ENST00000561760 610 ntBASIC21.59■■□□□ 1.05
COL11A1P12107 MIR3917-201ENST00000580971 93 ntBASIC21.59■■□□□ 1.05
COL11A1P12107 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL11A1P12107 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
COL11A1P12107 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.59■■□□□ 1.05
COL11A1P12107 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL11A1P12107 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL11A1P12107 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL11A1P12107 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL11A1P12107 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL11A1P12107 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.58■■□□□ 1.05
COL11A1P12107 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL11A1P12107 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL11A1P12107 RCC2P3-201ENST00000418112 1537 ntBASIC21.58■■□□□ 1.04
COL11A1P12107 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL11A1P12107 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.58■■□□□ 1.04
COL11A1P12107 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL11A1P12107 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL11A1P12107 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A1P12107 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A1P12107 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A1P12107 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms