Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.29■□□□□ 0.84
FAM228BP0C875 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.29■□□□□ 0.84
FAM228BP0C875 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FAM228BP0C875 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.29■□□□□ 0.84
FAM228BP0C875 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.29■□□□□ 0.84
FAM228BP0C875 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FAM228BP0C875 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
FAM228BP0C875 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FAM228BP0C875 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
FAM228BP0C875 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.29■□□□□ 0.84
FAM228BP0C875 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
FAM228BP0C875 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FAM228BP0C875 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.29■□□□□ 0.84
FAM228BP0C875 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FAM228BP0C875 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FAM228BP0C875 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.28■□□□□ 0.84
FAM228BP0C875 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
FAM228BP0C875 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FAM228BP0C875 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
FAM228BP0C875 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FAM228BP0C875 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
FAM228BP0C875 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FAM228BP0C875 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FAM228BP0C875 RNA5SP413-201ENST00000516373 109 ntBASIC20.28■□□□□ 0.84
FAM228BP0C875 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.28■□□□□ 0.84
FAM228BP0C875 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FAM228BP0C875 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.28■□□□□ 0.84
FAM228BP0C875 AC004264.1-201ENST00000608354 794 ntBASIC20.28■□□□□ 0.84
FAM228BP0C875 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FAM228BP0C875 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.28■□□□□ 0.84
FAM228BP0C875 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FAM228BP0C875 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
FAM228BP0C875 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.28■□□□□ 0.84
FAM228BP0C875 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
FAM228BP0C875 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.28■□□□□ 0.84
FAM228BP0C875 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FAM228BP0C875 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FAM228BP0C875 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FAM228BP0C875 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
FAM228BP0C875 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.27■□□□□ 0.84
FAM228BP0C875 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FAM228BP0C875 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
FAM228BP0C875 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FAM228BP0C875 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.27■□□□□ 0.84
FAM228BP0C875 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.27■□□□□ 0.84
FAM228BP0C875 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
FAM228BP0C875 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.27■□□□□ 0.84
FAM228BP0C875 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FAM228BP0C875 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FAM228BP0C875 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
FAM228BP0C875 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
FAM228BP0C875 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FAM228BP0C875 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
FAM228BP0C875 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
FAM228BP0C875 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.27■□□□□ 0.84
FAM228BP0C875 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.27■□□□□ 0.84
FAM228BP0C875 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.27■□□□□ 0.84
FAM228BP0C875 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
FAM228BP0C875 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
FAM228BP0C875 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FAM228BP0C875 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
FAM228BP0C875 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FAM228BP0C875 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FAM228BP0C875 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
FAM228BP0C875 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.27■□□□□ 0.84
FAM228BP0C875 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
FAM228BP0C875 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.27■□□□□ 0.83
FAM228BP0C875 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.27■□□□□ 0.83
FAM228BP0C875 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
FAM228BP0C875 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FAM228BP0C875 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FAM228BP0C875 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.26■□□□□ 0.83
FAM228BP0C875 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
FAM228BP0C875 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.26■□□□□ 0.83
FAM228BP0C875 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.26■□□□□ 0.83
FAM228BP0C875 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
FAM228BP0C875 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FAM228BP0C875 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FAM228BP0C875 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FAM228BP0C875 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.26■□□□□ 0.83
FAM228BP0C875 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FAM228BP0C875 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.26■□□□□ 0.83
FAM228BP0C875 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
FAM228BP0C875 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.26■□□□□ 0.83
FAM228BP0C875 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FAM228BP0C875 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.26■□□□□ 0.83
FAM228BP0C875 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FAM228BP0C875 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.26■□□□□ 0.83
FAM228BP0C875 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
FAM228BP0C875 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FAM228BP0C875 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FAM228BP0C875 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FAM228BP0C875 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
FAM228BP0C875 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
FAM228BP0C875 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.26■□□□□ 0.83
FAM228BP0C875 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
FAM228BP0C875 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FAM228BP0C875 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.25■□□□□ 0.83
FAM228BP0C875 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
FAM228BP0C875 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms