Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN1P07384 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CAPN1P07384 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CAPN1P07384 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.7■□□□□ 0.58
CAPN1P07384 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN1P07384 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.7■□□□□ 0.58
CAPN1P07384 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.7■□□□□ 0.58
CAPN1P07384 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN1P07384 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN1P07384 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN1P07384 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.7■□□□□ 0.58
CAPN1P07384 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.7■□□□□ 0.58
CAPN1P07384 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN1P07384 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
CAPN1P07384 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CAPN1P07384 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN1P07384 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN1P07384 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN1P07384 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CAPN1P07384 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN1P07384 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CAPN1P07384 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN1P07384 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN1P07384 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.69■□□□□ 0.58
CAPN1P07384 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CAPN1P07384 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CAPN1P07384 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CAPN1P07384 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CAPN1P07384 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN1P07384 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.69■□□□□ 0.58
CAPN1P07384 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.69■□□□□ 0.58
CAPN1P07384 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN1P07384 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.69■□□□□ 0.58
CAPN1P07384 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN1P07384 KRT18P16-201ENST00000510337 1294 ntBASIC18.69■□□□□ 0.58
CAPN1P07384 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.69■□□□□ 0.58
CAPN1P07384 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.69■□□□□ 0.58
CAPN1P07384 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.69■□□□□ 0.58
CAPN1P07384 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.69■□□□□ 0.58
CAPN1P07384 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN1P07384 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.69■□□□□ 0.58
CAPN1P07384 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.69■□□□□ 0.58
CAPN1P07384 AC026471.5-201ENST00000615068 467 ntBASIC18.69■□□□□ 0.58
CAPN1P07384 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CAPN1P07384 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CAPN1P07384 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN1P07384 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN1P07384 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CAPN1P07384 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN1P07384 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN1P07384 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN1P07384 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN1P07384 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN1P07384 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.68■□□□□ 0.58
CAPN1P07384 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN1P07384 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN1P07384 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.68■□□□□ 0.58
CAPN1P07384 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.68■□□□□ 0.58
CAPN1P07384 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN1P07384 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.68■□□□□ 0.58
CAPN1P07384 AL353807.1-201ENST00000427475 662 ntBASIC18.68■□□□□ 0.58
CAPN1P07384 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.68■□□□□ 0.58
CAPN1P07384 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN1P07384 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN1P07384 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.68■□□□□ 0.58
CAPN1P07384 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.68■□□□□ 0.58
CAPN1P07384 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.68■□□□□ 0.58
CAPN1P07384 CD177P1-201ENST00000606252 935 ntBASIC18.68■□□□□ 0.58
CAPN1P07384 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN1P07384 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN1P07384 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN1P07384 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN1P07384 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CAPN1P07384 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN1P07384 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.68■□□□□ 0.58
CAPN1P07384 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.68■□□□□ 0.58
CAPN1P07384 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN1P07384 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN1P07384 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.67■□□□□ 0.58
CAPN1P07384 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.67■□□□□ 0.58
CAPN1P07384 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.67■□□□□ 0.58
CAPN1P07384 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN1P07384 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN1P07384 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN1P07384 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN1P07384 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN1P07384 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.67■□□□□ 0.58
CAPN1P07384 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN1P07384 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN1P07384 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN1P07384 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN1P07384 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN1P07384 TUBB8P6-201ENST00000436895 1288 ntBASIC18.67■□□□□ 0.58
CAPN1P07384 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.67■□□□□ 0.58
CAPN1P07384 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.67■□□□□ 0.58
CAPN1P07384 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.67■□□□□ 0.58
CAPN1P07384 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.67■□□□□ 0.58
CAPN1P07384 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.67■□□□□ 0.58
CAPN1P07384 AC004264.1-201ENST00000608354 794 ntBASIC18.67■□□□□ 0.58
CAPN1P07384 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms