Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.7■■□□□ 1.06
ALDH1A1P00352 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ALDH1A1P00352 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.69■■□□□ 1.06
ALDH1A1P00352 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
ALDH1A1P00352 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
ALDH1A1P00352 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ALDH1A1P00352 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.69■■□□□ 1.06
ALDH1A1P00352 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ALDH1A1P00352 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
ALDH1A1P00352 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ALDH1A1P00352 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ALDH1A1P00352 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ALDH1A1P00352 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ALDH1A1P00352 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ALDH1A1P00352 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ALDH1A1P00352 MED22-202ENST00000371999 987 ntTSL 3 BASIC21.69■■□□□ 1.06
ALDH1A1P00352 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
ALDH1A1P00352 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC21.69■■□□□ 1.06
ALDH1A1P00352 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
ALDH1A1P00352 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.69■■□□□ 1.06
ALDH1A1P00352 KRT18P67-201ENST00000432816 1264 ntBASIC21.69■■□□□ 1.06
ALDH1A1P00352 AF186996.4-201ENST00000467186 377 ntBASIC21.69■■□□□ 1.06
ALDH1A1P00352 GPR32P1-201ENST00000601788 811 ntBASIC21.69■■□□□ 1.06
ALDH1A1P00352 ABBA01031661.1-201ENST00000634362 1253 ntBASIC21.69■■□□□ 1.06
ALDH1A1P00352 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ALDH1A1P00352 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
ALDH1A1P00352 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ALDH1A1P00352 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ALDH1A1P00352 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ALDH1A1P00352 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.69■■□□□ 1.06
ALDH1A1P00352 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ALDH1A1P00352 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ALDH1A1P00352 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ALDH1A1P00352 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
ALDH1A1P00352 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.68■■□□□ 1.06
ALDH1A1P00352 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
ALDH1A1P00352 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
ALDH1A1P00352 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ALDH1A1P00352 BX842568.4-201ENST00000421222 227 ntBASIC21.68■■□□□ 1.06
ALDH1A1P00352 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC21.68■■□□□ 1.06
ALDH1A1P00352 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC21.68■■□□□ 1.06
ALDH1A1P00352 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.68■■□□□ 1.06
ALDH1A1P00352 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.68■■□□□ 1.06
ALDH1A1P00352 NSUN5P1-202ENST00000421140 1535 ntBASIC21.68■■□□□ 1.06
ALDH1A1P00352 NSUN5P2-203ENST00000457352 1529 ntBASIC21.68■■□□□ 1.06
ALDH1A1P00352 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ALDH1A1P00352 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.68■■□□□ 1.06
ALDH1A1P00352 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.68■■□□□ 1.06
ALDH1A1P00352 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
ALDH1A1P00352 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ALDH1A1P00352 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ALDH1A1P00352 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ALDH1A1P00352 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
ALDH1A1P00352 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.67■■□□□ 1.06
ALDH1A1P00352 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.67■■□□□ 1.06
ALDH1A1P00352 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ALDH1A1P00352 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.67■■□□□ 1.06
ALDH1A1P00352 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.67■■□□□ 1.06
ALDH1A1P00352 KRT8P3-201ENST00000519669 1449 ntBASIC21.67■■□□□ 1.06
ALDH1A1P00352 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ALDH1A1P00352 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.67■■□□□ 1.06
ALDH1A1P00352 TERC-201ENST00000602385 541 ntBASIC21.67■■□□□ 1.06
ALDH1A1P00352 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.67■■□□□ 1.06
ALDH1A1P00352 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
ALDH1A1P00352 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.67■■□□□ 1.06
ALDH1A1P00352 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ALDH1A1P00352 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ALDH1A1P00352 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
ALDH1A1P00352 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ALDH1A1P00352 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
ALDH1A1P00352 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ALDH1A1P00352 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
ALDH1A1P00352 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ALDH1A1P00352 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ALDH1A1P00352 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ALDH1A1P00352 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ALDH1A1P00352 NUS1P2-201ENST00000417358 873 ntBASIC21.66■■□□□ 1.06
ALDH1A1P00352 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC21.66■■□□□ 1.06
ALDH1A1P00352 POLD2P1-201ENST00000511220 997 ntBASIC21.66■■□□□ 1.06
ALDH1A1P00352 AC104390.1-201ENST00000555663 520 ntBASIC21.66■■□□□ 1.06
ALDH1A1P00352 AC010240.3-201ENST00000607688 395 ntBASIC21.66■■□□□ 1.06
ALDH1A1P00352 AL592071.1-201ENST00000611956 408 ntBASIC21.66■■□□□ 1.06
ALDH1A1P00352 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.66■■□□□ 1.06
ALDH1A1P00352 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ALDH1A1P00352 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.66■■□□□ 1.06
ALDH1A1P00352 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ALDH1A1P00352 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.65■■□□□ 1.06
ALDH1A1P00352 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
ALDH1A1P00352 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ALDH1A1P00352 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ALDH1A1P00352 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ALDH1A1P00352 FABP5-202ENST00000396359 986 ntTSL 5 BASIC21.65■■□□□ 1.06
ALDH1A1P00352 POM121L3P-201ENST00000419331 1163 ntBASIC21.65■■□□□ 1.06
ALDH1A1P00352 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.65■■□□□ 1.06
ALDH1A1P00352 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.65■■□□□ 1.06
ALDH1A1P00352 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.65■■□□□ 1.06
ALDH1A1P00352 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC21.65■■□□□ 1.06
ALDH1A1P00352 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
ALDH1A1P00352 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
ALDH1A1P00352 AC124864.1-201ENST00000623408 392 ntBASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms