Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
BEST1O76090 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BEST1O76090 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
BEST1O76090 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BEST1O76090 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
BEST1O76090 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
BEST1O76090 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
BEST1O76090 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
BEST1O76090 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
BEST1O76090 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BEST1O76090 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BEST1O76090 KRT8P45-201ENST00000414328 1447 ntBASIC19.95■□□□□ 0.78
BEST1O76090 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
BEST1O76090 GPAT2P1-201ENST00000444924 1672 ntBASIC19.95■□□□□ 0.78
BEST1O76090 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BEST1O76090 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.95■□□□□ 0.78
BEST1O76090 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
BEST1O76090 AL138966.2-201ENST00000621997 464 ntBASIC19.95■□□□□ 0.78
BEST1O76090 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
BEST1O76090 AC092865.7-201ENST00000641832 219 ntBASIC19.95■□□□□ 0.78
BEST1O76090 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.95■□□□□ 0.78
BEST1O76090 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
BEST1O76090 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
BEST1O76090 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BEST1O76090 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.95■□□□□ 0.78
BEST1O76090 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BEST1O76090 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
BEST1O76090 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.94■□□□□ 0.78
BEST1O76090 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.94■□□□□ 0.78
BEST1O76090 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
BEST1O76090 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
BEST1O76090 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
BEST1O76090 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BEST1O76090 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BEST1O76090 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.94■□□□□ 0.78
BEST1O76090 TMPOP1-202ENST00000424642 1267 ntBASIC19.94■□□□□ 0.78
BEST1O76090 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.94■□□□□ 0.78
BEST1O76090 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.94■□□□□ 0.78
BEST1O76090 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.94■□□□□ 0.78
BEST1O76090 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.94■□□□□ 0.78
BEST1O76090 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.94■□□□□ 0.78
BEST1O76090 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.94■□□□□ 0.78
BEST1O76090 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
BEST1O76090 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.94■□□□□ 0.78
BEST1O76090 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.94■□□□□ 0.78
BEST1O76090 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BEST1O76090 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
BEST1O76090 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BEST1O76090 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
BEST1O76090 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BEST1O76090 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BEST1O76090 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BEST1O76090 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BEST1O76090 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
BEST1O76090 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.93■□□□□ 0.78
BEST1O76090 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BEST1O76090 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.93■□□□□ 0.78
BEST1O76090 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
BEST1O76090 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BEST1O76090 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BEST1O76090 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BEST1O76090 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BEST1O76090 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.93■□□□□ 0.78
BEST1O76090 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.93■□□□□ 0.78
BEST1O76090 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.93■□□□□ 0.78
BEST1O76090 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
BEST1O76090 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
BEST1O76090 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.93■□□□□ 0.78
BEST1O76090 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BEST1O76090 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.93■□□□□ 0.78
BEST1O76090 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BEST1O76090 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.93■□□□□ 0.78
BEST1O76090 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
BEST1O76090 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BEST1O76090 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BEST1O76090 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BEST1O76090 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.93■□□□□ 0.78
BEST1O76090 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
BEST1O76090 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BEST1O76090 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BEST1O76090 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BEST1O76090 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.92■□□□□ 0.78
BEST1O76090 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.92■□□□□ 0.78
BEST1O76090 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BEST1O76090 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.92■□□□□ 0.78
BEST1O76090 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
BEST1O76090 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
BEST1O76090 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BEST1O76090 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BEST1O76090 LIN28AP1-201ENST00000429574 405 ntBASIC19.92■□□□□ 0.78
BEST1O76090 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.92■□□□□ 0.78
BEST1O76090 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BEST1O76090 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.92■□□□□ 0.78
BEST1O76090 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
BEST1O76090 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BEST1O76090 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
BEST1O76090 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BEST1O76090 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.92■□□□□ 0.78
BEST1O76090 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
BEST1O76090 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms