Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.05■□□□□ 0.64
GPC4O75487 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GPC4O75487 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.05■□□□□ 0.64
GPC4O75487 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GPC4O75487 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
GPC4O75487 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
GPC4O75487 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
GPC4O75487 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GPC4O75487 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GPC4O75487 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.04■□□□□ 0.64
GPC4O75487 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GPC4O75487 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GPC4O75487 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
GPC4O75487 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GPC4O75487 ZNF815P-204ENST00000434898 1737 ntBASIC19.04■□□□□ 0.64
GPC4O75487 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.04■□□□□ 0.64
GPC4O75487 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.04■□□□□ 0.64
GPC4O75487 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
GPC4O75487 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.04■□□□□ 0.64
GPC4O75487 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.04■□□□□ 0.64
GPC4O75487 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
GPC4O75487 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.04■□□□□ 0.64
GPC4O75487 FAM197Y4-202ENST00000622692 608 ntBASIC19.04■□□□□ 0.64
GPC4O75487 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
GPC4O75487 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.04■□□□□ 0.64
GPC4O75487 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.04■□□□□ 0.64
GPC4O75487 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GPC4O75487 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
GPC4O75487 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GPC4O75487 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GPC4O75487 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GPC4O75487 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GPC4O75487 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GPC4O75487 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GPC4O75487 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
GPC4O75487 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GPC4O75487 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GPC4O75487 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GPC4O75487 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GPC4O75487 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
GPC4O75487 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GPC4O75487 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GPC4O75487 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.03■□□□□ 0.64
GPC4O75487 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.03■□□□□ 0.64
GPC4O75487 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
GPC4O75487 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GPC4O75487 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GPC4O75487 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.03■□□□□ 0.64
GPC4O75487 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GPC4O75487 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GPC4O75487 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GPC4O75487 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GPC4O75487 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GPC4O75487 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
GPC4O75487 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GPC4O75487 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GPC4O75487 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GPC4O75487 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GPC4O75487 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
GPC4O75487 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.02■□□□□ 0.64
GPC4O75487 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
GPC4O75487 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GPC4O75487 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
GPC4O75487 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GPC4O75487 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
GPC4O75487 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.02■□□□□ 0.64
GPC4O75487 AL158047.1-201ENST00000445918 881 ntBASIC19.02■□□□□ 0.64
GPC4O75487 UBE2SP1-201ENST00000450587 669 ntBASIC19.02■□□□□ 0.64
GPC4O75487 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GPC4O75487 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.02■□□□□ 0.64
GPC4O75487 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
GPC4O75487 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GPC4O75487 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.02■□□□□ 0.64
GPC4O75487 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.02■□□□□ 0.64
GPC4O75487 RARRES2P10-201ENST00000564312 460 ntBASIC19.02■□□□□ 0.64
GPC4O75487 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.02■□□□□ 0.64
GPC4O75487 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.02■□□□□ 0.64
GPC4O75487 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.02■□□□□ 0.64
GPC4O75487 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
GPC4O75487 HLA-A-209ENST00000638375 975 ntBASIC19.02■□□□□ 0.64
GPC4O75487 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GPC4O75487 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
GPC4O75487 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.02■□□□□ 0.64
GPC4O75487 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.02■□□□□ 0.63
GPC4O75487 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
GPC4O75487 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
GPC4O75487 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
GPC4O75487 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.01■□□□□ 0.63
GPC4O75487 HTR7P1-201ENST00000538670 1336 ntBASIC19.01■□□□□ 0.63
GPC4O75487 AC104417.2-201ENST00000562989 1793 ntBASIC19.01■□□□□ 0.63
GPC4O75487 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.01■□□□□ 0.63
GPC4O75487 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
GPC4O75487 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GPC4O75487 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GPC4O75487 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GPC4O75487 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
GPC4O75487 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
GPC4O75487 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
GPC4O75487 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GPC4O75487 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms