Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CPNE3O75131 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.22■□□□□ 0.51
CPNE3O75131 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CPNE3O75131 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE3O75131 AC007663.1-201ENST00000438948 1240 ntBASIC18.22■□□□□ 0.51
CPNE3O75131 AC104076.2-201ENST00000448912 469 ntBASIC18.22■□□□□ 0.51
CPNE3O75131 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE3O75131 CKBP1-201ENST00000565489 1086 ntBASIC18.22■□□□□ 0.51
CPNE3O75131 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.22■□□□□ 0.51
CPNE3O75131 AC006011.2-201ENST00000621313 1158 ntBASIC18.22■□□□□ 0.51
CPNE3O75131 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.22■□□□□ 0.51
CPNE3O75131 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE3O75131 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.22■□□□□ 0.51
CPNE3O75131 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CPNE3O75131 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
CPNE3O75131 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE3O75131 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE3O75131 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE3O75131 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE3O75131 AC092338.2-201ENST00000568827 1415 ntBASIC18.22■□□□□ 0.51
CPNE3O75131 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.22■□□□□ 0.51
CPNE3O75131 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE3O75131 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE3O75131 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CPNE3O75131 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE3O75131 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE3O75131 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE3O75131 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE3O75131 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE3O75131 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE3O75131 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CPNE3O75131 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CPNE3O75131 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE3O75131 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CPNE3O75131 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.21■□□□□ 0.51
CPNE3O75131 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.21■□□□□ 0.51
CPNE3O75131 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE3O75131 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.21■□□□□ 0.51
CPNE3O75131 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE3O75131 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CPNE3O75131 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
CPNE3O75131 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CPNE3O75131 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.21■□□□□ 0.51
CPNE3O75131 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.21■□□□□ 0.51
CPNE3O75131 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE3O75131 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE3O75131 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.21■□□□□ 0.51
CPNE3O75131 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE3O75131 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE3O75131 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CPNE3O75131 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE3O75131 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE3O75131 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE3O75131 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.21■□□□□ 0.51
CPNE3O75131 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE3O75131 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CPNE3O75131 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE3O75131 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.2■□□□□ 0.5
CPNE3O75131 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CPNE3O75131 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE3O75131 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.2■□□□□ 0.5
CPNE3O75131 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE3O75131 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.2■□□□□ 0.5
CPNE3O75131 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.2■□□□□ 0.5
CPNE3O75131 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CPNE3O75131 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
CPNE3O75131 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.2■□□□□ 0.5
CPNE3O75131 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE3O75131 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
CPNE3O75131 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.2■□□□□ 0.5
CPNE3O75131 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.2■□□□□ 0.5
CPNE3O75131 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.2■□□□□ 0.5
CPNE3O75131 PRSS44-201ENST00000515154 1146 ntBASIC18.2■□□□□ 0.5
CPNE3O75131 AL512604.3-201ENST00000569583 964 ntBASIC18.2■□□□□ 0.5
CPNE3O75131 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.2■□□□□ 0.5
CPNE3O75131 AL023803.3-201ENST00000615559 522 ntBASIC18.2■□□□□ 0.5
CPNE3O75131 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE3O75131 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE3O75131 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.2■□□□□ 0.5
CPNE3O75131 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CPNE3O75131 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
CPNE3O75131 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE3O75131 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CPNE3O75131 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE3O75131 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.2■□□□□ 0.5
CPNE3O75131 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
CPNE3O75131 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CPNE3O75131 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.2■□□□□ 0.5
CPNE3O75131 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE3O75131 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE3O75131 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.2■□□□□ 0.5
CPNE3O75131 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE3O75131 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
CPNE3O75131 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.19■□□□□ 0.5
CPNE3O75131 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CPNE3O75131 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPNE3O75131 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPNE3O75131 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPNE3O75131 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPNE3O75131 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms