Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LDB2O43679 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LDB2O43679 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LDB2O43679 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LDB2O43679 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
LDB2O43679 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.01■□□□□ 0.63
LDB2O43679 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.01■□□□□ 0.63
LDB2O43679 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.01■□□□□ 0.63
LDB2O43679 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.01■□□□□ 0.63
LDB2O43679 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.01■□□□□ 0.63
LDB2O43679 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.01■□□□□ 0.63
LDB2O43679 REXO1L10P-201ENST00000615707 1290 ntBASIC19.01■□□□□ 0.63
LDB2O43679 REXO1L12P-201ENST00000622156 912 ntBASIC19.01■□□□□ 0.63
LDB2O43679 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.01■□□□□ 0.63
LDB2O43679 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.01■□□□□ 0.63
LDB2O43679 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LDB2O43679 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.01■□□□□ 0.63
LDB2O43679 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LDB2O43679 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LDB2O43679 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
LDB2O43679 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LDB2O43679 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LDB2O43679 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19■□□□□ 0.63
LDB2O43679 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
LDB2O43679 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LDB2O43679 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LDB2O43679 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19■□□□□ 0.63
LDB2O43679 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
LDB2O43679 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19■□□□□ 0.63
LDB2O43679 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LDB2O43679 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19■□□□□ 0.63
LDB2O43679 AC026471.5-201ENST00000615068 467 ntBASIC19■□□□□ 0.63
LDB2O43679 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LDB2O43679 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LDB2O43679 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19■□□□□ 0.63
LDB2O43679 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19■□□□□ 0.63
LDB2O43679 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19■□□□□ 0.63
LDB2O43679 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19■□□□□ 0.63
LDB2O43679 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19■□□□□ 0.63
LDB2O43679 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19■□□□□ 0.63
LDB2O43679 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LDB2O43679 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LDB2O43679 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
LDB2O43679 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.99■□□□□ 0.63
LDB2O43679 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LDB2O43679 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.99■□□□□ 0.63
LDB2O43679 AC093525.10-201ENST00000625130 1569 ntBASIC18.99■□□□□ 0.63
LDB2O43679 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LDB2O43679 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LDB2O43679 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LDB2O43679 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LDB2O43679 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
LDB2O43679 MIR718-201ENST00000390190 70 ntBASIC18.99■□□□□ 0.63
LDB2O43679 AL596275.1-201ENST00000423464 877 ntBASIC18.99■□□□□ 0.63
LDB2O43679 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.99■□□□□ 0.63
LDB2O43679 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.99■□□□□ 0.63
LDB2O43679 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.99■□□□□ 0.63
LDB2O43679 DGCR10-201ENST00000609839 495 ntBASIC18.99■□□□□ 0.63
LDB2O43679 AC083906.6-201ENST00000641366 219 ntBASIC18.99■□□□□ 0.63
LDB2O43679 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LDB2O43679 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LDB2O43679 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.99■□□□□ 0.63
LDB2O43679 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LDB2O43679 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.99■□□□□ 0.63
LDB2O43679 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LDB2O43679 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
LDB2O43679 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
LDB2O43679 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
LDB2O43679 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LDB2O43679 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LDB2O43679 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LDB2O43679 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LDB2O43679 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LDB2O43679 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LDB2O43679 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LDB2O43679 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
LDB2O43679 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.98■□□□□ 0.63
LDB2O43679 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.98■□□□□ 0.63
LDB2O43679 AC096733.2-201ENST00000609937 1394 ntBASIC18.98■□□□□ 0.63
LDB2O43679 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LDB2O43679 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LDB2O43679 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LDB2O43679 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LDB2O43679 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
LDB2O43679 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LDB2O43679 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LDB2O43679 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
LDB2O43679 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
LDB2O43679 TSPY7P-201ENST00000431358 1114 ntBASIC18.98■□□□□ 0.63
LDB2O43679 AL355355.2-201ENST00000442321 338 ntBASIC18.98■□□□□ 0.63
LDB2O43679 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
LDB2O43679 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.98■□□□□ 0.63
LDB2O43679 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.98■□□□□ 0.63
LDB2O43679 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.98■□□□□ 0.63
LDB2O43679 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.98■□□□□ 0.63
LDB2O43679 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
LDB2O43679 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
LDB2O43679 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
LDB2O43679 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LDB2O43679 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms