Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN4O14493 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.91■□□□□ 0.46
CLDN4O14493 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CLDN4O14493 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN4O14493 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN4O14493 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN4O14493 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN4O14493 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN4O14493 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN4O14493 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN4O14493 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN4O14493 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.91■□□□□ 0.46
CLDN4O14493 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN4O14493 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN4O14493 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN4O14493 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN4O14493 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN4O14493 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.91■□□□□ 0.46
CLDN4O14493 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.91■□□□□ 0.46
CLDN4O14493 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.91■□□□□ 0.46
CLDN4O14493 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN4O14493 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN4O14493 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN4O14493 FEM1AP3-201ENST00000403722 1741 ntBASIC17.91■□□□□ 0.46
CLDN4O14493 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN4O14493 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN4O14493 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN4O14493 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN4O14493 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN4O14493 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
CLDN4O14493 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN4O14493 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN4O14493 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN4O14493 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN4O14493 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN4O14493 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN4O14493 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN4O14493 FP475955.4-201ENST00000623131 1990 ntBASIC17.9■□□□□ 0.46
CLDN4O14493 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN4O14493 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN4O14493 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN4O14493 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN4O14493 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN4O14493 AL390955.1-201ENST00000428694 934 ntBASIC17.9■□□□□ 0.46
CLDN4O14493 CA15P1-201ENST00000481698 905 ntBASIC17.9■□□□□ 0.46
CLDN4O14493 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.9■□□□□ 0.46
CLDN4O14493 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN4O14493 NAPSB-206ENST00000562112 1266 ntBASIC17.9■□□□□ 0.46
CLDN4O14493 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.9■□□□□ 0.46
CLDN4O14493 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
CLDN4O14493 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.9■□□□□ 0.46
CLDN4O14493 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CLDN4O14493 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN4O14493 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN4O14493 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
CLDN4O14493 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN4O14493 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.9■□□□□ 0.46
CLDN4O14493 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN4O14493 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN4O14493 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CLDN4O14493 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CLDN4O14493 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CLDN4O14493 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CLDN4O14493 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.89■□□□□ 0.46
CLDN4O14493 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN4O14493 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.89■□□□□ 0.45
CLDN4O14493 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN4O14493 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.89■□□□□ 0.45
CLDN4O14493 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.89■□□□□ 0.45
CLDN4O14493 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN4O14493 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CLDN4O14493 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CLDN4O14493 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN4O14493 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN4O14493 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN4O14493 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN4O14493 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN4O14493 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN4O14493 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CLDN4O14493 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CLDN4O14493 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN4O14493 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN4O14493 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.89■□□□□ 0.45
CLDN4O14493 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN4O14493 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN4O14493 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CLDN4O14493 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN4O14493 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CLDN4O14493 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN4O14493 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN4O14493 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN4O14493 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.89■□□□□ 0.45
CLDN4O14493 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.88■□□□□ 0.45
CLDN4O14493 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN4O14493 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN4O14493 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
CLDN4O14493 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN4O14493 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN4O14493 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CLDN4O14493 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms