Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 SLC25A1P2-201ENST00000430693 912 ntBASIC17.32■□□□□ 0.36
NPIPA2E9PIF3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPIPA2E9PIF3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPIPA2E9PIF3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.32■□□□□ 0.36
NPIPA2E9PIF3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NPIPA2E9PIF3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.32■□□□□ 0.36
NPIPA2E9PIF3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.32■□□□□ 0.36
NPIPA2E9PIF3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPIPA2E9PIF3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NPIPA2E9PIF3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPIPA2E9PIF3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPIPA2E9PIF3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
NPIPA2E9PIF3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.32■□□□□ 0.36
NPIPA2E9PIF3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NPIPA2E9PIF3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPIPA2E9PIF3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NPIPA2E9PIF3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NPIPA2E9PIF3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.31■□□□□ 0.36
NPIPA2E9PIF3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPIPA2E9PIF3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.31■□□□□ 0.36
NPIPA2E9PIF3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.31■□□□□ 0.36
NPIPA2E9PIF3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.31■□□□□ 0.36
NPIPA2E9PIF3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.31■□□□□ 0.36
NPIPA2E9PIF3 NTF6B-201ENST00000591913 560 ntBASIC17.31■□□□□ 0.36
NPIPA2E9PIF3 AC006011.2-201ENST00000621313 1158 ntBASIC17.31■□□□□ 0.36
NPIPA2E9PIF3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.31■□□□□ 0.36
NPIPA2E9PIF3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
NPIPA2E9PIF3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPIPA2E9PIF3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPIPA2E9PIF3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPIPA2E9PIF3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.31■□□□□ 0.36
NPIPA2E9PIF3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPIPA2E9PIF3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPIPA2E9PIF3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NPIPA2E9PIF3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NPIPA2E9PIF3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPIPA2E9PIF3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NPIPA2E9PIF3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 AC007663.1-201ENST00000438948 1240 ntBASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 BX664615.1-201ENST00000443558 458 ntBASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPIPA2E9PIF3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA2E9PIF3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA2E9PIF3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
NPIPA2E9PIF3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NPIPA2E9PIF3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA2E9PIF3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA2E9PIF3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NPIPA2E9PIF3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA2E9PIF3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA2E9PIF3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA2E9PIF3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA2E9PIF3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
NPIPA2E9PIF3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA2E9PIF3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA2E9PIF3 AK4P3-201ENST00000418260 669 ntBASIC17.29■□□□□ 0.36
NPIPA2E9PIF3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.29■□□□□ 0.36
NPIPA2E9PIF3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.29■□□□□ 0.36
NPIPA2E9PIF3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA2E9PIF3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.29■□□□□ 0.36
NPIPA2E9PIF3 KRT8P41-201ENST00000533985 1514 ntBASIC17.29■□□□□ 0.36
NPIPA2E9PIF3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA2E9PIF3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA2E9PIF3 ZNF815P-204ENST00000434898 1737 ntBASIC17.29■□□□□ 0.36
NPIPA2E9PIF3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.29■□□□□ 0.36
NPIPA2E9PIF3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA2E9PIF3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.29■□□□□ 0.36
NPIPA2E9PIF3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms