Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC85CA6NKD9 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC85CA6NKD9 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
CCDC85CA6NKD9 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC85CA6NKD9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.08■□□□□ 0.97
CCDC85CA6NKD9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CCDC85CA6NKD9 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CCDC85CA6NKD9 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.08■□□□□ 0.96
CCDC85CA6NKD9 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CCDC85CA6NKD9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC85CA6NKD9 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC85CA6NKD9 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC85CA6NKD9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CCDC85CA6NKD9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC85CA6NKD9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC85CA6NKD9 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC85CA6NKD9 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CCDC85CA6NKD9 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC85CA6NKD9 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
CCDC85CA6NKD9 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC85CA6NKD9 AC015922.1-201ENST00000421102 1152 ntBASIC21.07■□□□□ 0.96
CCDC85CA6NKD9 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC85CA6NKD9 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC85CA6NKD9 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
CCDC85CA6NKD9 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC21.07■□□□□ 0.96
CCDC85CA6NKD9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC85CA6NKD9 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC85CA6NKD9 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC85CA6NKD9 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC21.07■□□□□ 0.96
CCDC85CA6NKD9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CCDC85CA6NKD9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC85CA6NKD9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
CCDC85CA6NKD9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC85CA6NKD9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC85CA6NKD9 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CCDC85CA6NKD9 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
CCDC85CA6NKD9 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC85CA6NKD9 KLK8-202ENST00000320838 456 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC85CA6NKD9 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC85CA6NKD9 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC85CA6NKD9 COPE-202ENST00000349893 948 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC85CA6NKD9 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC85CA6NKD9 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.06■□□□□ 0.96
CCDC85CA6NKD9 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC85CA6NKD9 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC85CA6NKD9 AC114341.1-201ENST00000618070 349 ntBASIC21.06■□□□□ 0.96
CCDC85CA6NKD9 SERF2-217ENST00000630046 862 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC85CA6NKD9 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC85CA6NKD9 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC85CA6NKD9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC85CA6NKD9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC85CA6NKD9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC85CA6NKD9 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC85CA6NKD9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC85CA6NKD9 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC85CA6NKD9 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC85CA6NKD9 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
CCDC85CA6NKD9 AC012640.2-201ENST00000561606 901 ntBASIC21.05■□□□□ 0.96
CCDC85CA6NKD9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC85CA6NKD9 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
CCDC85CA6NKD9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC85CA6NKD9 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC85CA6NKD9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC85CA6NKD9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC85CA6NKD9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC85CA6NKD9 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CCDC85CA6NKD9 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC85CA6NKD9 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC85CA6NKD9 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC85CA6NKD9 RBM17P3-201ENST00000417687 1192 ntBASIC21.04■□□□□ 0.96
CCDC85CA6NKD9 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC85CA6NKD9 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC85CA6NKD9 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC85CA6NKD9 AC009533.2-201ENST00000543664 586 ntBASIC21.04■□□□□ 0.96
CCDC85CA6NKD9 AC021087.4-201ENST00000563761 564 ntBASIC21.04■□□□□ 0.96
CCDC85CA6NKD9 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.04■□□□□ 0.96
CCDC85CA6NKD9 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC85CA6NKD9 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC85CA6NKD9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC85CA6NKD9 AC005229.4-201ENST00000610085 2198 ntBASIC21.04■□□□□ 0.96
CCDC85CA6NKD9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC85CA6NKD9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CCDC85CA6NKD9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC85CA6NKD9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC85CA6NKD9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC85CA6NKD9 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC85CA6NKD9 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC85CA6NKD9 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC85CA6NKD9 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC85CA6NKD9 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC85CA6NKD9 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
CCDC85CA6NKD9 GSAP-205ENST00000430584 600 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC85CA6NKD9 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC85CA6NKD9 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC85CA6NKD9 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC85CA6NKD9 YBX1P5-201ENST00000509441 847 ntBASIC21.03■□□□□ 0.96
CCDC85CA6NKD9 UNC93B6-202ENST00000528242 690 ntBASIC21.03■□□□□ 0.96
CCDC85CA6NKD9 AL121603.2-201ENST00000557373 2117 ntBASIC21.03■□□□□ 0.96
CCDC85CA6NKD9 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC85CA6NKD9 MIR3180-5-201ENST00000583743 153 ntBASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms