Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 INGX-201ENST00000359239 846 ntBASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 RCN1P1-201ENST00000400413 996 ntBASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 AC113347.1-201ENST00000413321 391 ntBASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 AL137013.1-201ENST00000432946 1228 ntBASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 TSPY23P-201ENST00000440136 739 ntBASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
IGHV4-28A0A0C4DH34 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 AC090340.1-201ENST00000620778 4980 ntBASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 AC005521.1-201ENST00000393351 872 ntBASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 LIN28AP1-201ENST00000429574 405 ntBASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 KRT18P57-201ENST00000443599 1254 ntBASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 ATP5G1P1-201ENST00000448724 379 ntBASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC13.73□□□□□ -0.21
IGHV4-28A0A0C4DH34 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 TERF1P1-201ENST00000311003 1181 ntBASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 TMPOP1-202ENST00000424642 1267 ntBASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 TSPY17P-201ENST00000450329 467 ntBASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 CA15P1-201ENST00000481698 905 ntBASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 RN7SL850P-201ENST00000579959 291 ntBASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 FAM87A-204ENST00000613235 858 ntBASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 TP73-202ENST00000354437 2140 ntTSL 5 BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV4-28A0A0C4DH34 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms