Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-1A0A0A6YYK1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-1A0A0A6YYK1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-1A0A0A6YYK1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV8-1A0A0A6YYK1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-1A0A0A6YYK1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.46□□□□□ -0.1
TRAV8-1A0A0A6YYK1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV8-1A0A0A6YYK1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV8-1A0A0A6YYK1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.46□□□□□ -0.1
TRAV8-1A0A0A6YYK1 GOLGA6L3-201ENST00000507199 1679 ntBASIC14.46□□□□□ -0.1
TRAV8-1A0A0A6YYK1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 AL390719.1-204ENST00000412397 1219 ntBASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 AL512625.2-201ENST00000417533 625 ntBASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 ANO7L1-203ENST00000602586 1720 ntBASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 NOC2LP2-201ENST00000407594 1944 ntBASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV8-1A0A0A6YYK1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 AC005181.1-201ENST00000604782 1256 ntBASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 MIR6821-201ENST00000617625 74 ntBASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
TRAV8-1A0A0A6YYK1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-1A0A0A6YYK1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms