Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 RN7SKP209-201ENST00000516888 304 ntBASIC3.6□□□□□ -1.83
HS3ST3A1Q9Y663 RN7SKP60-201ENST00000516985 239 ntBASIC3.6□□□□□ -1.83
HS3ST3A1Q9Y663 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.6□□□□□ -1.83
HS3ST3A1Q9Y663 AC008011.1-201ENST00000545989 227 ntBASIC3.6□□□□□ -1.83
HS3ST3A1Q9Y663 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.6□□□□□ -1.83
HS3ST3A1Q9Y663 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.6□□□□□ -1.83
HS3ST3A1Q9Y663 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.6□□□□□ -1.83
HS3ST3A1Q9Y663 LINC02555-201ENST00000563933 1951 ntBASIC3.6□□□□□ -1.83
HS3ST3A1Q9Y663 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 SNORD50.1-201ENST00000362987 71 ntBASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 RNU6-790P-201ENST00000384479 105 ntBASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 PTMAP5-201ENST00000393073 333 ntBASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 MTHFD2P2-201ENST00000407725 247 ntBASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 RNU4-65P-201ENST00000410473 140 ntBASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 RNU6-607P-201ENST00000411283 108 ntBASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 Y_RNA.626-201ENST00000411288 95 ntBASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 RPL21P90-201ENST00000415692 466 ntBASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 AP000907.1-201ENST00000428428 510 ntBASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 AC092423.1-201ENST00000430165 186 ntBASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 AL353748.1-201ENST00000440753 474 ntBASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 RBMY2UP-201ENST00000453474 324 ntBASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 SERF1AP1-201ENST00000514575 187 ntBASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 SNORA31.3-201ENST00000516029 96 ntBASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 AMZ2P1-203ENST00000565833 850 ntBASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 LRRC37A5P-203ENST00000580181 585 ntBASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 AL139395.1-201ENST00000603662 160 ntBASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 U2.14-201ENST00000615943 113 ntBASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 AL031601.2-202ENST00000622650 282 ntBASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 PRO1804-201ENST00000623780 2050 ntBASIC3.59□□□□□ -1.83
HS3ST3A1Q9Y663 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.59□□□□□ -1.84
HS3ST3A1Q9Y663 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HS3ST3A1Q9Y663 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.59□□□□□ -1.84
HS3ST3A1Q9Y663 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 RNA5SP50-201ENST00000363731 107 ntBASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 SNORD74.4-201ENST00000364129 80 ntBASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 RNU6-804P-201ENST00000384286 107 ntBASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 MIR578-201ENST00000384828 96 ntBASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 U3.39-201ENST00000408569 239 ntBASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 RNU2-51P-201ENST00000410708 197 ntBASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 BX842559.1-201ENST00000419615 532 ntBASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 AL049830.2-201ENST00000480072 201 ntBASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 ACA59.1-201ENST00000515966 143 ntBASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 SCARNA24.2-201ENST00000516968 130 ntBASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 AC010186.2-204ENST00000537668 439 ntBASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 AC007458.1-201ENST00000542812 373 ntBASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 MIR3144-201ENST00000579460 79 ntBASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 AC012468.1-201ENST00000604888 430 ntBASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 AC073657.2-201ENST00000605661 303 ntBASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 AC034102.8-201ENST00000615146 484 ntBASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 MIR376A1-201ENST00000616574 68 ntBASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 U6.92-201ENST00000636464 89 ntBASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 ZNF299P-201ENST00000406845 1804 ntBASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HS3ST3A1Q9Y663 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
HS3ST3A1Q9Y663 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HS3ST3A1Q9Y663 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
HS3ST3A1Q9Y663 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
HS3ST3A1Q9Y663 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HS3ST3A1Q9Y663 RNU6-22P-201ENST00000384355 107 ntBASIC3.57□□□□□ -1.84
HS3ST3A1Q9Y663 RNU6-102P-201ENST00000384485 104 ntBASIC3.57□□□□□ -1.84
HS3ST3A1Q9Y663 RNU6-1117P-201ENST00000384525 104 ntBASIC3.57□□□□□ -1.84
HS3ST3A1Q9Y663 RNA5SP494-201ENST00000410653 129 ntBASIC3.57□□□□□ -1.84
HS3ST3A1Q9Y663 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.57□□□□□ -1.84
HS3ST3A1Q9Y663 AC092573.2-201ENST00000434546 243 ntBASIC3.57□□□□□ -1.84
HS3ST3A1Q9Y663 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HS3ST3A1Q9Y663 HIGD1AP2-201ENST00000446367 280 ntBASIC3.57□□□□□ -1.84
HS3ST3A1Q9Y663 SYF2P1-201ENST00000550658 413 ntBASIC3.57□□□□□ -1.84
HS3ST3A1Q9Y663 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.57□□□□□ -1.84
HS3ST3A1Q9Y663 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.57□□□□□ -1.84
HS3ST3A1Q9Y663 Z83818.1-201ENST00000603584 150 ntBASIC3.57□□□□□ -1.84
HS3ST3A1Q9Y663 MIR15A-201ENST00000607334 83 ntBASIC3.57□□□□□ -1.84
HS3ST3A1Q9Y663 AC096577.2-201ENST00000611455 153 ntBASIC3.57□□□□□ -1.84
HS3ST3A1Q9Y663 U6.106-201ENST00000636360 105 ntBASIC3.57□□□□□ -1.84
HS3ST3A1Q9Y663 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HS3ST3A1Q9Y663 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms