Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM35Q9UPQ4 MIR4330-201ENST00000579077 105 ntBASIC6.07□□□□□ -1.44
TRIM35Q9UPQ4 AL022345.2-201ENST00000606307 135 ntBASIC6.07□□□□□ -1.44
TRIM35Q9UPQ4 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
TRIM35Q9UPQ4 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM35Q9UPQ4 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM35Q9UPQ4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM35Q9UPQ4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM35Q9UPQ4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
TRIM35Q9UPQ4 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM35Q9UPQ4 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM35Q9UPQ4 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
TRIM35Q9UPQ4 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM35Q9UPQ4 STX3-208ENST00000641815 3236 ntBASIC6.06□□□□□ -1.44
TRIM35Q9UPQ4 MIR590-201ENST00000385008 97 ntBASIC6.06□□□□□ -1.44
TRIM35Q9UPQ4 RNA5SP332-201ENST00000391063 115 ntBASIC6.06□□□□□ -1.44
TRIM35Q9UPQ4 MIR1278-201ENST00000408753 81 ntBASIC6.06□□□□□ -1.44
TRIM35Q9UPQ4 RPL23AP1-201ENST00000428990 471 ntBASIC6.06□□□□□ -1.44
TRIM35Q9UPQ4 RN7SL459P-201ENST00000481078 302 ntBASIC6.06□□□□□ -1.44
TRIM35Q9UPQ4 AC025946.2-201ENST00000603398 234 ntBASIC6.06□□□□□ -1.44
TRIM35Q9UPQ4 AC019159.1-201ENST00000605094 187 ntBASIC6.06□□□□□ -1.44
TRIM35Q9UPQ4 AL359198.2-201ENST00000611836 194 ntBASIC6.06□□□□□ -1.44
TRIM35Q9UPQ4 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM35Q9UPQ4 AL133383.2-201ENST00000622958 2336 ntBASIC6.06□□□□□ -1.44
TRIM35Q9UPQ4 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
TRIM35Q9UPQ4 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
TRIM35Q9UPQ4 OR14L1P-202ENST00000641545 3009 ntBASIC6.06□□□□□ -1.44
TRIM35Q9UPQ4 AC125257.1-201ENST00000560400 2930 ntBASIC6.05□□□□□ -1.44
TRIM35Q9UPQ4 SNORD56.1-201ENST00000362913 68 ntBASIC6.05□□□□□ -1.44
TRIM35Q9UPQ4 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
TRIM35Q9UPQ4 MIR320B2-201ENST00000408479 138 ntBASIC6.05□□□□□ -1.44
TRIM35Q9UPQ4 AC126124.2-201ENST00000413542 321 ntBASIC6.05□□□□□ -1.44
TRIM35Q9UPQ4 AL135786.1-201ENST00000415892 214 ntBASIC6.05□□□□□ -1.44
TRIM35Q9UPQ4 AL691449.1-201ENST00000426570 421 ntBASIC6.05□□□□□ -1.44
TRIM35Q9UPQ4 RPL31P41-201ENST00000477967 372 ntBASIC6.05□□□□□ -1.44
TRIM35Q9UPQ4 RPS23P1-201ENST00000491662 432 ntBASIC6.05□□□□□ -1.44
TRIM35Q9UPQ4 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC6.05□□□□□ -1.44
TRIM35Q9UPQ4 AL160236.1-201ENST00000556317 195 ntBASIC6.05□□□□□ -1.44
TRIM35Q9UPQ4 AL137843.1-201ENST00000605078 385 ntBASIC6.05□□□□□ -1.44
TRIM35Q9UPQ4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM35Q9UPQ4 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
TRIM35Q9UPQ4 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM35Q9UPQ4 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
TRIM35Q9UPQ4 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM35Q9UPQ4 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM35Q9UPQ4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM35Q9UPQ4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM35Q9UPQ4 RNU6-1080P-201ENST00000383982 107 ntBASIC6.04□□□□□ -1.44
TRIM35Q9UPQ4 Y_RNA.415-201ENST00000384012 112 ntBASIC6.04□□□□□ -1.44
TRIM35Q9UPQ4 MIR544A-201ENST00000384855 91 ntBASIC6.04□□□□□ -1.44
TRIM35Q9UPQ4 RNU6ATAC5P-201ENST00000388104 126 ntBASIC6.04□□□□□ -1.44
TRIM35Q9UPQ4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC6.04□□□□□ -1.44
TRIM35Q9UPQ4 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM35Q9UPQ4 RNA5SP490-201ENST00000517141 136 ntBASIC6.04□□□□□ -1.44
TRIM35Q9UPQ4 AP001781.1-201ENST00000530977 207 ntBASIC6.04□□□□□ -1.44
TRIM35Q9UPQ4 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM35Q9UPQ4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM35Q9UPQ4 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM35Q9UPQ4 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM35Q9UPQ4 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.04□□□□□ -1.44
TRIM35Q9UPQ4 ZNF137P-201ENST00000456718 1920 ntBASIC6.03□□□□□ -1.44
TRIM35Q9UPQ4 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM35Q9UPQ4 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM35Q9UPQ4 OFD1P6Y-202ENST00000451061 2724 ntBASIC6.03□□□□□ -1.44
TRIM35Q9UPQ4 RNU6-837P-201ENST00000391056 108 ntBASIC6.03□□□□□ -1.44
TRIM35Q9UPQ4 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM35Q9UPQ4 AC007919.1-201ENST00000429380 217 ntBASIC6.03□□□□□ -1.44
TRIM35Q9UPQ4 PGBD4P5-201ENST00000445958 426 ntBASIC6.03□□□□□ -1.44
TRIM35Q9UPQ4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC6.03□□□□□ -1.44
TRIM35Q9UPQ4 AC010531.2-201ENST00000465012 153 ntBASIC6.03□□□□□ -1.44
TRIM35Q9UPQ4 RN7SL738P-201ENST00000470264 297 ntBASIC6.03□□□□□ -1.44
TRIM35Q9UPQ4 UBE2Q2P9-201ENST00000490086 202 ntBASIC6.03□□□□□ -1.44
TRIM35Q9UPQ4 RNA5SP228-201ENST00000516232 133 ntBASIC6.03□□□□□ -1.44
TRIM35Q9UPQ4 GNRHR2P1-201ENST00000555315 631 ntBASIC6.03□□□□□ -1.44
TRIM35Q9UPQ4 CYCSP39-201ENST00000565821 309 ntBASIC6.03□□□□□ -1.44
TRIM35Q9UPQ4 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.03□□□□□ -1.44
TRIM35Q9UPQ4 MIR6748-201ENST00000610433 71 ntBASIC6.03□□□□□ -1.44
TRIM35Q9UPQ4 MIR6820-201ENST00000611508 62 ntBASIC6.03□□□□□ -1.44
TRIM35Q9UPQ4 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
TRIM35Q9UPQ4 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM35Q9UPQ4 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
TRIM35Q9UPQ4 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM35Q9UPQ4 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM35Q9UPQ4 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
TRIM35Q9UPQ4 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
TRIM35Q9UPQ4 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
TRIM35Q9UPQ4 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TRIM35Q9UPQ4 Y_RNA.432-201ENST00000384087 111 ntBASIC6.02□□□□□ -1.45
TRIM35Q9UPQ4 Y_RNA.593-201ENST00000410292 98 ntBASIC6.02□□□□□ -1.45
TRIM35Q9UPQ4 AC244670.1-201ENST00000436879 112 ntBASIC6.02□□□□□ -1.45
TRIM35Q9UPQ4 ATP6V0E1P2-201ENST00000441771 245 ntBASIC6.02□□□□□ -1.45
TRIM35Q9UPQ4 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM35Q9UPQ4 AL451050.1-201ENST00000450126 415 ntBASIC6.02□□□□□ -1.45
TRIM35Q9UPQ4 AL021397.1-201ENST00000451806 248 ntBASIC6.02□□□□□ -1.45
TRIM35Q9UPQ4 AC090515.1-201ENST00000465295 476 ntBASIC6.02□□□□□ -1.45
TRIM35Q9UPQ4 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM35Q9UPQ4 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM35Q9UPQ4 POLR3GP1-201ENST00000594073 261 ntBASIC6.02□□□□□ -1.45
TRIM35Q9UPQ4 MIR8069-1-201ENST00000616627 86 ntBASIC6.02□□□□□ -1.45
TRIM35Q9UPQ4 MIR8069-2-201ENST00000621412 86 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms