Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 IGKV2D-19-201ENST00000523346 262 ntBASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 AC093249.4-201ENST00000564755 259 ntBASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 AL138963.2-201ENST00000605137 226 ntBASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 AC010999.1-201ENST00000611856 324 ntBASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 AL391903.3-201ENST00000612158 163 ntBASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 AC015726.2-201ENST00000620112 122 ntBASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 AL359955.1-201ENST00000455242 3275 ntBASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 MFSD8-242ENST00000641690 4199 ntBASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 AC006206.1-201ENST00000544842 3387 ntBASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 Y_RNA.24-201ENST00000362508 103 ntBASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 RNU6-640P-201ENST00000363693 105 ntBASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 Y_RNA.329-201ENST00000365209 107 ntBASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 Y_RNA.348-201ENST00000365403 103 ntBASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 U3.19-201ENST00000390893 196 ntBASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 SNORA75.5-201ENST00000391291 81 ntBASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 AL591034.1-201ENST00000407447 340 ntBASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 RNU6-712P-201ENST00000410558 100 ntBASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 AC009963.1-201ENST00000417265 157 ntBASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 AL158147.1-201ENST00000443970 75 ntBASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 RPS27P1-201ENST00000450552 247 ntBASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 RN7SL293P-201ENST00000481765 281 ntBASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 RN7SL691P-201ENST00000494487 301 ntBASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 AC136601.2-201ENST00000604356 474 ntBASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 AC131238.1-201ENST00000617135 328 ntBASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 AC004817.4-201ENST00000602396 3625 ntBASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
COL25A1Q9BXS0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 Y_RNA.521-201ENST00000384560 114 ntBASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 AL358075.3-201ENST00000426289 226 ntBASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 RPL23AP52-201ENST00000439311 478 ntBASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 AC245047.8-201ENST00000456455 284 ntBASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 snoU109.2-201ENST00000459316 135 ntBASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 SNORA31.19-201ENST00000517079 126 ntBASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 AC136628.3-201ENST00000521868 290 ntBASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 AC004832.5-201ENST00000608677 401 ntBASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 AL353748.2-201ENST00000622148 471 ntBASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 MIR1245B-201ENST00000636115 69 ntBASIC4.59□□□□□ -1.67
COL25A1Q9BXS0 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.59□□□□□ -1.68
COL25A1Q9BXS0 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.59□□□□□ -1.68
COL25A1Q9BXS0 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.68
COL25A1Q9BXS0 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.59□□□□□ -1.68
COL25A1Q9BXS0 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.59□□□□□ -1.68
COL25A1Q9BXS0 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
COL25A1Q9BXS0 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.59□□□□□ -1.68
COL25A1Q9BXS0 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 AC092681.1-201ENST00000297369 291 ntBASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 Y_RNA.293-201ENST00000364908 93 ntBASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 RNA5SP126-201ENST00000365092 109 ntBASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 RNU6-880P-201ENST00000384526 107 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 302.9 ms