Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RNU6-217P-201ENST00000384164 104 ntBASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 RNU6-1181P-201ENST00000384191 106 ntBASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 RNU6-768P-201ENST00000384683 107 ntBASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 MIR15B-201ENST00000385045 98 ntBASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 RNA5SP239-201ENST00000410218 129 ntBASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 AC019205.3-201ENST00000424573 156 ntBASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 RPL39P29-201ENST00000447779 157 ntBASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 AC073850.1-201ENST00000449243 255 ntBASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 RPL26P9-201ENST00000457466 433 ntBASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 RNA5SP249-201ENST00000516127 99 ntBASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 Y_RNA.712-201ENST00000517011 92 ntBASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 AC023043.3-201ENST00000593113 385 ntBASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 MIR3529-201ENST00000637713 78 ntBASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 LINC01355-201ENST00000566551 5444 ntBASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC116Q8IYX3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC116Q8IYX3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
CCDC116Q8IYX3 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC116Q8IYX3 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC116Q8IYX3 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC116Q8IYX3 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC116Q8IYX3 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CCDC116Q8IYX3 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CCDC116Q8IYX3 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC116Q8IYX3 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.62□□□□□ -1.67
CCDC116Q8IYX3 RNU6-147P-201ENST00000383983 107 ntBASIC4.62□□□□□ -1.67
CCDC116Q8IYX3 MIR320B2-201ENST00000408479 138 ntBASIC4.62□□□□□ -1.67
CCDC116Q8IYX3 H2AFZP5-201ENST00000446960 382 ntBASIC4.62□□□□□ -1.67
CCDC116Q8IYX3 snoU13.20-201ENST00000459180 104 ntBASIC4.62□□□□□ -1.67
CCDC116Q8IYX3 RPL23AP70-201ENST00000483361 460 ntBASIC4.62□□□□□ -1.67
CCDC116Q8IYX3 RN7SL97P-201ENST00000486780 299 ntBASIC4.62□□□□□ -1.67
CCDC116Q8IYX3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC116Q8IYX3 RNU5E-3P-201ENST00000515913 68 ntBASIC4.62□□□□□ -1.67
CCDC116Q8IYX3 RNU6-107P-201ENST00000516643 102 ntBASIC4.62□□□□□ -1.67
CCDC116Q8IYX3 AP004242.1-201ENST00000533701 349 ntBASIC4.62□□□□□ -1.67
CCDC116Q8IYX3 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.62□□□□□ -1.67
CCDC116Q8IYX3 AL672167.1-204ENST00000641875 3017 ntBASIC4.62□□□□□ -1.67
CCDC116Q8IYX3 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC116Q8IYX3 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC116Q8IYX3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CCDC116Q8IYX3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CCDC116Q8IYX3 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CCDC116Q8IYX3 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 RNA5SP305-201ENST00000362665 119 ntBASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 RNA5SP502-201ENST00000362694 119 ntBASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 Y_RNA.309-201ENST00000365046 111 ntBASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 Y_RNA.415-201ENST00000384012 112 ntBASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 MIR526A2-201ENST00000390198 65 ntBASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 AL031003.1-201ENST00000404229 172 ntBASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 RN7SKP213-201ENST00000410746 298 ntBASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 AC245028.1-201ENST00000423259 256 ntBASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 HMGB3P8-201ENST00000449709 577 ntBASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 RN7SL517P-201ENST00000462240 305 ntBASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 AC090525.1-201ENST00000479116 478 ntBASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 RPL36AP41-201ENST00000493820 306 ntBASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 AC140172.1-201ENST00000502928 141 ntBASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 ENPP7P9-201ENST00000514456 627 ntBASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 AC009163.5-201ENST00000575421 637 ntBASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 AC012468.1-201ENST00000604888 430 ntBASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 AL591034.3-201ENST00000605511 685 ntBASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 ADAM3A-203ENST00000461344 2157 ntBASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 AC107068.1-201ENST00000563286 4218 ntBASIC4.61□□□□□ -1.67
CCDC116Q8IYX3 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 RNA5SP507-201ENST00000363603 121 ntBASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 RNY1P11-201ENST00000363759 113 ntBASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 SNORD115-30-201ENST00000364117 82 ntBASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 RN7SKP280-201ENST00000364196 304 ntBASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 SNORA70-201ENST00000384436 135 ntBASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 MT-TT-201ENST00000387460 66 ntBASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 RNU6-588P-201ENST00000410281 105 ntBASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 RNU6-710P-201ENST00000410424 105 ntBASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 RN7SKP216-201ENST00000411050 312 ntBASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 AC000111.2-201ENST00000448200 210 ntBASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 AC012308.1-201ENST00000451232 178 ntBASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms