Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RC3H1Q5TC82 AC009541.1-201ENST00000438279 2662 ntBASIC5.28□□□□□ -1.56
RC3H1Q5TC82 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.28□□□□□ -1.56
RC3H1Q5TC82 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.28□□□□□ -1.56
RC3H1Q5TC82 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RC3H1Q5TC82 FTLP6-201ENST00000355274 422 ntBASIC5.28□□□□□ -1.56
RC3H1Q5TC82 RNU4-17P-201ENST00000365598 141 ntBASIC5.28□□□□□ -1.56
RC3H1Q5TC82 Y_RNA.542-201ENST00000384641 111 ntBASIC5.28□□□□□ -1.56
RC3H1Q5TC82 MIR1911-201ENST00000410783 80 ntBASIC5.28□□□□□ -1.56
RC3H1Q5TC82 HSPE1P12-201ENST00000412576 301 ntBASIC5.28□□□□□ -1.56
RC3H1Q5TC82 AC006011.1-201ENST00000442758 349 ntBASIC5.28□□□□□ -1.56
RC3H1Q5TC82 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC5.28□□□□□ -1.56
RC3H1Q5TC82 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC5.28□□□□□ -1.56
RC3H1Q5TC82 AC074290.1-201ENST00000448883 135 ntBASIC5.28□□□□□ -1.56
RC3H1Q5TC82 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.28□□□□□ -1.56
RC3H1Q5TC82 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC5.28□□□□□ -1.56
RC3H1Q5TC82 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC5.28□□□□□ -1.56
RC3H1Q5TC82 RNU6-191P-201ENST00000516295 94 ntBASIC5.28□□□□□ -1.56
RC3H1Q5TC82 DEFB131C-201ENST00000528817 165 ntBASIC5.28□□□□□ -1.56
RC3H1Q5TC82 AL645944.1-201ENST00000603857 493 ntBASIC5.28□□□□□ -1.56
RC3H1Q5TC82 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.28□□□□□ -1.56
RC3H1Q5TC82 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.28□□□□□ -1.56
RC3H1Q5TC82 MIR4496-201ENST00000635896 61 ntBASIC5.28□□□□□ -1.56
RC3H1Q5TC82 U4.7-201ENST00000638126 106 ntBASIC5.28□□□□□ -1.56
RC3H1Q5TC82 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.28□□□□□ -1.56
RC3H1Q5TC82 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
RC3H1Q5TC82 AC015813.6-201ENST00000624409 5808 ntBASIC5.28□□□□□ -1.56
RC3H1Q5TC82 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.28□□□□□ -1.56
RC3H1Q5TC82 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RC3H1Q5TC82 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RC3H1Q5TC82 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RC3H1Q5TC82 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.27□□□□□ -1.57
RC3H1Q5TC82 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RC3H1Q5TC82 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RC3H1Q5TC82 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
RC3H1Q5TC82 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.27□□□□□ -1.57
RC3H1Q5TC82 RNU6-429P-201ENST00000384582 108 ntBASIC5.27□□□□□ -1.57
RC3H1Q5TC82 MIR7-3-201ENST00000384898 110 ntBASIC5.27□□□□□ -1.57
RC3H1Q5TC82 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RC3H1Q5TC82 EBAG9P1-201ENST00000418955 543 ntBASIC5.27□□□□□ -1.57
RC3H1Q5TC82 AL691449.1-201ENST00000426570 421 ntBASIC5.27□□□□□ -1.57
RC3H1Q5TC82 AC026726.1-201ENST00000512859 601 ntBASIC5.27□□□□□ -1.57
RC3H1Q5TC82 AC010265.1-201ENST00000513509 211 ntBASIC5.27□□□□□ -1.57
RC3H1Q5TC82 CARD18-203ENST00000532895 422 ntTSL 2 BASIC5.27□□□□□ -1.57
RC3H1Q5TC82 AL391261.3-201ENST00000557194 520 ntBASIC5.27□□□□□ -1.57
RC3H1Q5TC82 AC110491.1-201ENST00000562191 2010 ntBASIC5.27□□□□□ -1.57
RC3H1Q5TC82 AC005176.2-201ENST00000596933 147 ntBASIC5.27□□□□□ -1.57
RC3H1Q5TC82 MIR8069-1-201ENST00000616627 86 ntBASIC5.27□□□□□ -1.57
RC3H1Q5TC82 AC068831.7-201ENST00000616954 363 ntBASIC5.27□□□□□ -1.57
RC3H1Q5TC82 TUG1_4.1-201ENST00000619464 181 ntBASIC5.27□□□□□ -1.57
RC3H1Q5TC82 MIR8069-2-201ENST00000621412 86 ntBASIC5.27□□□□□ -1.57
RC3H1Q5TC82 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.27□□□□□ -1.57
RC3H1Q5TC82 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RC3H1Q5TC82 AC092593.1-201ENST00000515413 1815 ntBASIC5.27□□□□□ -1.57
RC3H1Q5TC82 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.27□□□□□ -1.57
RC3H1Q5TC82 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
RC3H1Q5TC82 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
RC3H1Q5TC82 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RC3H1Q5TC82 AC000123.3-201ENST00000624029 4975 ntBASIC5.26□□□□□ -1.57
RC3H1Q5TC82 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
RC3H1Q5TC82 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RC3H1Q5TC82 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RC3H1Q5TC82 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RC3H1Q5TC82 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RC3H1Q5TC82 RNU5E-7P-201ENST00000365290 117 ntBASIC5.26□□□□□ -1.57
RC3H1Q5TC82 RNU6-281P-201ENST00000384212 103 ntBASIC5.26□□□□□ -1.57
RC3H1Q5TC82 RNU1-44P-201ENST00000384453 163 ntBASIC5.26□□□□□ -1.57
RC3H1Q5TC82 MIR1179-201ENST00000408703 91 ntBASIC5.26□□□□□ -1.57
RC3H1Q5TC82 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.26□□□□□ -1.57
RC3H1Q5TC82 AC005042.3-201ENST00000453230 174 ntBASIC5.26□□□□□ -1.57
RC3H1Q5TC82 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.26□□□□□ -1.57
RC3H1Q5TC82 RPL23AP49-201ENST00000492925 468 ntBASIC5.26□□□□□ -1.57
RC3H1Q5TC82 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC5.26□□□□□ -1.57
RC3H1Q5TC82 AC006499.6-201ENST00000511169 607 ntBASIC5.26□□□□□ -1.57
RC3H1Q5TC82 RNU6-659P-201ENST00000516454 104 ntBASIC5.26□□□□□ -1.57
RC3H1Q5TC82 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.26□□□□□ -1.57
RC3H1Q5TC82 AC090616.3-201ENST00000582184 217 ntBASIC5.26□□□□□ -1.57
RC3H1Q5TC82 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.26□□□□□ -1.57
RC3H1Q5TC82 MIR4512-201ENST00000583257 77 ntBASIC5.26□□□□□ -1.57
RC3H1Q5TC82 AC022441.3-201ENST00000605737 136 ntBASIC5.26□□□□□ -1.57
RC3H1Q5TC82 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RC3H1Q5TC82 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RC3H1Q5TC82 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.26□□□□□ -1.57
RC3H1Q5TC82 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.26□□□□□ -1.57
RC3H1Q5TC82 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
RC3H1Q5TC82 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
RC3H1Q5TC82 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
RC3H1Q5TC82 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
RC3H1Q5TC82 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RC3H1Q5TC82 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC5.25□□□□□ -1.57
RC3H1Q5TC82 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.25□□□□□ -1.57
RC3H1Q5TC82 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
RC3H1Q5TC82 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RC3H1Q5TC82 RNU6-1249P-201ENST00000363237 111 ntBASIC5.25□□□□□ -1.57
RC3H1Q5TC82 RNU6-899P-201ENST00000363947 107 ntBASIC5.25□□□□□ -1.57
RC3H1Q5TC82 RNU6-270P-201ENST00000364131 105 ntBASIC5.25□□□□□ -1.57
RC3H1Q5TC82 RNU6-1145P-201ENST00000384246 107 ntBASIC5.25□□□□□ -1.57
RC3H1Q5TC82 MIR329-1-201ENST00000385028 80 ntBASIC5.25□□□□□ -1.57
RC3H1Q5TC82 MIR34A-201ENST00000385130 110 ntBASIC5.25□□□□□ -1.57
RC3H1Q5TC82 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms