Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 Y_RNA.342-201ENST00000365352 113 ntBASIC5.54□□□□□ -1.52
NUBP1P53384 AL117342.1-201ENST00000404861 406 ntBASIC5.54□□□□□ -1.52
NUBP1P53384 AC023141.4-201ENST00000412031 328 ntBASIC5.54□□□□□ -1.52
NUBP1P53384 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.54□□□□□ -1.52
NUBP1P53384 AL354714.3-201ENST00000447284 493 ntBASIC5.54□□□□□ -1.52
NUBP1P53384 RPS27P22-201ENST00000478056 241 ntBASIC5.54□□□□□ -1.52
NUBP1P53384 AC008897.1-201ENST00000494006 347 ntBASIC5.54□□□□□ -1.52
NUBP1P53384 RNU6-65P-201ENST00000516332 98 ntBASIC5.54□□□□□ -1.52
NUBP1P53384 AC008033.2-201ENST00000542626 177 ntBASIC5.54□□□□□ -1.52
NUBP1P53384 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.54□□□□□ -1.52
NUBP1P53384 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC5.54□□□□□ -1.52
NUBP1P53384 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
NUBP1P53384 TNPO1P2-201ENST00000426249 2665 ntBASIC5.54□□□□□ -1.52
NUBP1P53384 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NUBP1P53384 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NUBP1P53384 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
NUBP1P53384 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NUBP1P53384 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NUBP1P53384 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NUBP1P53384 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
NUBP1P53384 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NUBP1P53384 DOCK11P1-201ENST00000553480 5932 ntBASIC5.54□□□□□ -1.52
NUBP1P53384 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
NUBP1P53384 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.53□□□□□ -1.52
NUBP1P53384 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
NUBP1P53384 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
NUBP1P53384 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
NUBP1P53384 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
NUBP1P53384 MAPK10-263ENST00000641052 4307 ntBASIC5.53□□□□□ -1.52
NUBP1P53384 RNU6-228P-201ENST00000362700 106 ntBASIC5.53□□□□□ -1.52
NUBP1P53384 AC008134.1-201ENST00000420943 193 ntBASIC5.53□□□□□ -1.52
NUBP1P53384 RPS4XP11-201ENST00000446897 772 ntBASIC5.53□□□□□ -1.52
NUBP1P53384 AC097484.1-201ENST00000471148 389 ntBASIC5.53□□□□□ -1.52
NUBP1P53384 RPS29P21-201ENST00000496272 170 ntBASIC5.53□□□□□ -1.52
NUBP1P53384 SCARNA16.4-201ENST00000516956 187 ntBASIC5.53□□□□□ -1.52
NUBP1P53384 AC011604.1-201ENST00000545978 196 ntBASIC5.53□□□□□ -1.52
NUBP1P53384 GNRHR2P1-201ENST00000555315 631 ntBASIC5.53□□□□□ -1.52
NUBP1P53384 AC209154.1-201ENST00000582156 337 ntBASIC5.53□□□□□ -1.52
NUBP1P53384 AC006272.2-201ENST00000594725 163 ntBASIC5.53□□□□□ -1.52
NUBP1P53384 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
NUBP1P53384 AC009487.4-201ENST00000624969 3585 ntBASIC5.53□□□□□ -1.52
NUBP1P53384 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
NUBP1P53384 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.53□□□□□ -1.52
NUBP1P53384 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NUBP1P53384 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NUBP1P53384 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NUBP1P53384 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.52□□□□□ -1.53
NUBP1P53384 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUBP1P53384 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
NUBP1P53384 RNA5SP189-201ENST00000364920 115 ntBASIC5.52□□□□□ -1.53
NUBP1P53384 RNA5SP225-201ENST00000410874 135 ntBASIC5.52□□□□□ -1.53
NUBP1P53384 AL162739.1-201ENST00000450606 307 ntBASIC5.52□□□□□ -1.53
NUBP1P53384 AC112771.1-201ENST00000463581 102 ntBASIC5.52□□□□□ -1.53
NUBP1P53384 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC5.52□□□□□ -1.53
NUBP1P53384 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NUBP1P53384 AC087385.3-201ENST00000620477 187 ntBASIC5.52□□□□□ -1.53
NUBP1P53384 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NUBP1P53384 AC020656.2-201ENST00000613291 5309 ntBASIC5.52□□□□□ -1.53
NUBP1P53384 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUBP1P53384 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
NUBP1P53384 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
NUBP1P53384 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUBP1P53384 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUBP1P53384 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.52□□□□□ -1.53
NUBP1P53384 AC011504.1-201ENST00000623331 4103 ntBASIC5.52□□□□□ -1.53
NUBP1P53384 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NUBP1P53384 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUBP1P53384 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.52□□□□□ -1.53
NUBP1P53384 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
NUBP1P53384 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUBP1P53384 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
NUBP1P53384 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.51□□□□□ -1.53
NUBP1P53384 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NUBP1P53384 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
NUBP1P53384 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NUBP1P53384 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.51□□□□□ -1.53
NUBP1P53384 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
NUBP1P53384 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NUBP1P53384 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
NUBP1P53384 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
NUBP1P53384 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NUBP1P53384 RN7SKP151-201ENST00000410230 316 ntBASIC5.51□□□□□ -1.53
NUBP1P53384 snoU13.28-201ENST00000459235 104 ntBASIC5.51□□□□□ -1.53
NUBP1P53384 AC090602.1-201ENST00000469695 252 ntBASIC5.51□□□□□ -1.53
NUBP1P53384 RNU6-240P-201ENST00000516098 97 ntBASIC5.51□□□□□ -1.53
NUBP1P53384 FAM27D1-201ENST00000612308 341 ntBASIC5.51□□□□□ -1.53
NUBP1P53384 U6.73-201ENST00000619194 103 ntBASIC5.51□□□□□ -1.53
NUBP1P53384 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC5.51□□□□□ -1.53
NUBP1P53384 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
NUBP1P53384 AC010889.1-201ENST00000566193 2666 ntBASIC5.51□□□□□ -1.53
NUBP1P53384 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
NUBP1P53384 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NUBP1P53384 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
NUBP1P53384 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NUBP1P53384 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
NUBP1P53384 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.51□□□□□ -1.53
NUBP1P53384 SCARNA15-201ENST00000607520 4325 ntBASIC5.51□□□□□ -1.53
NUBP1P53384 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
NUBP1P53384 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUBP1P53384 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms