Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 AC017079.2-201ENST00000416102 485 ntBASIC3.43□□□□□ -1.86
CLK3P49761 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.43□□□□□ -1.86
CLK3P49761 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.43□□□□□ -1.86
CLK3P49761 AL353997.1-201ENST00000432936 108 ntBASIC3.43□□□□□ -1.86
CLK3P49761 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.43□□□□□ -1.86
CLK3P49761 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.43□□□□□ -1.86
CLK3P49761 HMGB3P17-201ENST00000504195 649 ntBASIC3.43□□□□□ -1.86
CLK3P49761 RNU6-406P-201ENST00000516470 107 ntBASIC3.43□□□□□ -1.86
CLK3P49761 SNORA40.15-201ENST00000516884 107 ntBASIC3.43□□□□□ -1.86
CLK3P49761 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.43□□□□□ -1.86
CLK3P49761 AC104576.1-201ENST00000524225 88 ntBASIC3.43□□□□□ -1.86
CLK3P49761 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.43□□□□□ -1.86
CLK3P49761 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.43□□□□□ -1.86
CLK3P49761 AC006600.1-201ENST00000572529 153 ntBASIC3.43□□□□□ -1.86
CLK3P49761 AC002545.1-201ENST00000592511 181 ntBASIC3.43□□□□□ -1.86
CLK3P49761 VN1R91P-201ENST00000594377 169 ntBASIC3.43□□□□□ -1.86
CLK3P49761 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.43□□□□□ -1.86
CLK3P49761 RAC1P9-201ENST00000604990 392 ntBASIC3.43□□□□□ -1.86
CLK3P49761 MIR15A-201ENST00000607334 83 ntBASIC3.43□□□□□ -1.86
CLK3P49761 AC096772.1-201ENST00000609146 564 ntBASIC3.43□□□□□ -1.86
CLK3P49761 AC090132.2-201ENST00000615881 347 ntBASIC3.43□□□□□ -1.86
CLK3P49761 AL031601.2-202ENST00000622650 282 ntBASIC3.43□□□□□ -1.86
CLK3P49761 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.43□□□□□ -1.86
CLK3P49761 SRP72P2-201ENST00000344851 1979 ntBASIC3.43□□□□□ -1.86
CLK3P49761 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLK3P49761 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.43□□□□□ -1.86
CLK3P49761 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLK3P49761 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.42□□□□□ -1.86
CLK3P49761 RNY1P16-201ENST00000363063 111 ntBASIC3.42□□□□□ -1.86
CLK3P49761 RNU6-770P-201ENST00000363929 105 ntBASIC3.42□□□□□ -1.86
CLK3P49761 RN7SKP280-201ENST00000364196 304 ntBASIC3.42□□□□□ -1.86
CLK3P49761 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CLK3P49761 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLK3P49761 U3.42-201ENST00000408746 214 ntBASIC3.42□□□□□ -1.86
CLK3P49761 RNU6ATAC-201ENST00000408749 126 ntBASIC3.42□□□□□ -1.86
CLK3P49761 BX842559.1-201ENST00000419615 532 ntBASIC3.42□□□□□ -1.86
CLK3P49761 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.42□□□□□ -1.86
CLK3P49761 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.42□□□□□ -1.86
CLK3P49761 MTND4LP30-201ENST00000454092 297 ntBASIC3.42□□□□□ -1.86
CLK3P49761 AL133162.1-201ENST00000463228 453 ntBASIC3.42□□□□□ -1.86
CLK3P49761 AC025465.3-201ENST00000510570 311 ntBASIC3.42□□□□□ -1.86
CLK3P49761 AC144568.1-201ENST00000520139 137 ntBASIC3.42□□□□□ -1.86
CLK3P49761 CBX3P8-201ENST00000532412 525 ntBASIC3.42□□□□□ -1.86
CLK3P49761 AC004024.1-201ENST00000549244 247 ntBASIC3.42□□□□□ -1.86
CLK3P49761 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.42□□□□□ -1.86
CLK3P49761 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.42□□□□□ -1.86
CLK3P49761 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.42□□□□□ -1.86
CLK3P49761 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLK3P49761 MIR4273-201ENST00000582824 84 ntBASIC3.42□□□□□ -1.86
CLK3P49761 OR1M4P-201ENST00000589199 287 ntBASIC3.42□□□□□ -1.86
CLK3P49761 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLK3P49761 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLK3P49761 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.42□□□□□ -1.86
CLK3P49761 ZNF72P-201ENST00000425869 1908 ntBASIC3.42□□□□□ -1.86
CLK3P49761 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.42□□□□□ -1.86
CLK3P49761 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLK3P49761 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.42□□□□□ -1.86
CLK3P49761 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CLK3P49761 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CLK3P49761 AF117829.1-206ENST00000621883 3802 ntBASIC3.41□□□□□ -1.86
CLK3P49761 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLK3P49761 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
CLK3P49761 Y_RNA.19-201ENST00000362462 99 ntBASIC3.41□□□□□ -1.86
CLK3P49761 Y_RNA.26-201ENST00000362539 101 ntBASIC3.41□□□□□ -1.86
CLK3P49761 Y_RNA.64-201ENST00000362845 102 ntBASIC3.41□□□□□ -1.86
CLK3P49761 RNU6-200P-201ENST00000364743 107 ntBASIC3.41□□□□□ -1.86
CLK3P49761 Y_RNA.477-201ENST00000384352 108 ntBASIC3.41□□□□□ -1.86
CLK3P49761 RNU6-790P-201ENST00000384479 105 ntBASIC3.41□□□□□ -1.86
CLK3P49761 RNU6-33P-201ENST00000384793 107 ntBASIC3.41□□□□□ -1.86
CLK3P49761 MIR625-201ENST00000385047 85 ntBASIC3.41□□□□□ -1.86
CLK3P49761 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CLK3P49761 AL445529.1-201ENST00000398713 389 ntBASIC3.41□□□□□ -1.86
CLK3P49761 MIR548M-201ENST00000408260 86 ntBASIC3.41□□□□□ -1.86
CLK3P49761 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.41□□□□□ -1.86
CLK3P49761 UBE2D3P2-201ENST00000424409 445 ntBASIC3.41□□□□□ -1.86
CLK3P49761 AC007389.2-201ENST00000434630 306 ntBASIC3.41□□□□□ -1.86
CLK3P49761 SETP5-201ENST00000437270 562 ntBASIC3.41□□□□□ -1.86
CLK3P49761 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.41□□□□□ -1.86
CLK3P49761 AC009237.8-201ENST00000445492 379 ntBASIC3.41□□□□□ -1.86
CLK3P49761 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.41□□□□□ -1.86
CLK3P49761 U3.44-201ENST00000458938 192 ntBASIC3.41□□□□□ -1.86
CLK3P49761 FO393415.2-201ENST00000480085 343 ntBASIC3.41□□□□□ -1.86
CLK3P49761 ACA59.1-201ENST00000515966 143 ntBASIC3.41□□□□□ -1.86
CLK3P49761 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.41□□□□□ -1.86
CLK3P49761 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.41□□□□□ -1.86
CLK3P49761 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.41□□□□□ -1.86
CLK3P49761 RRN3P3-201ENST00000549207 578 ntBASIC3.41□□□□□ -1.86
CLK3P49761 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.41□□□□□ -1.86
CLK3P49761 AC106785.1-201ENST00000565935 262 ntBASIC3.41□□□□□ -1.86
CLK3P49761 AC087499.8-201ENST00000578406 226 ntBASIC3.41□□□□□ -1.86
CLK3P49761 LRRC37A5P-203ENST00000580181 585 ntBASIC3.41□□□□□ -1.86
CLK3P49761 AC137590.2-201ENST00000619709 240 ntBASIC3.41□□□□□ -1.86
CLK3P49761 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.41□□□□□ -1.86
CLK3P49761 SNORA50A-202ENST00000629536 136 ntBASIC3.41□□□□□ -1.86
CLK3P49761 AP000553.6-201ENST00000641242 118 ntBASIC3.41□□□□□ -1.86
CLK3P49761 AC093010.3-201ENST00000570269 15214 ntBASIC3.41□□□□□ -1.86
CLK3P49761 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLK3P49761 AL161912.2-201ENST00000565707 3007 ntBASIC3.41□□□□□ -1.86
CLK3P49761 MTND5P6-201ENST00000422338 1798 ntBASIC3.4□□□□□ -1.86
CLK3P49761 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.4□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms