Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 DAP3P1-201ENST00000441522 278 ntBASIC3.09□□□□□ -1.91
TNFSF4P23510 Z96811.1-201ENST00000445880 108 ntBASIC3.09□□□□□ -1.91
TNFSF4P23510 RPL39P29-201ENST00000447779 157 ntBASIC3.09□□□□□ -1.91
TNFSF4P23510 RPS27P27-201ENST00000498779 255 ntBASIC3.09□□□□□ -1.91
TNFSF4P23510 SCARNA3-201ENST00000517097 143 ntBASIC3.09□□□□□ -1.91
TNFSF4P23510 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.09□□□□□ -1.91
TNFSF4P23510 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.09□□□□□ -1.91
TNFSF4P23510 AC091135.1-201ENST00000585943 307 ntBASIC3.09□□□□□ -1.91
TNFSF4P23510 AC243960.4-201ENST00000600532 288 ntBASIC3.09□□□□□ -1.91
TNFSF4P23510 AC245389.1-201ENST00000605141 529 ntBASIC3.09□□□□□ -1.91
TNFSF4P23510 AC018889.1-201ENST00000605372 397 ntBASIC3.09□□□□□ -1.91
TNFSF4P23510 RNU1-30P-201ENST00000606575 163 ntBASIC3.09□□□□□ -1.91
TNFSF4P23510 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TNFSF4P23510 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.09□□□□□ -1.91
TNFSF4P23510 AL121772.2-201ENST00000614331 297 ntBASIC3.09□□□□□ -1.91
TNFSF4P23510 AC063943.3-201ENST00000615562 356 ntBASIC3.09□□□□□ -1.91
TNFSF4P23510 AC104260.1-201ENST00000616660 539 ntBASIC3.09□□□□□ -1.91
TNFSF4P23510 AL034408.1-202ENST00000636088 415 ntBASIC3.09□□□□□ -1.91
TNFSF4P23510 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.09□□□□□ -1.92
TNFSF4P23510 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
TNFSF4P23510 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
TNFSF4P23510 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.08□□□□□ -1.92
TNFSF4P23510 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.08□□□□□ -1.92
TNFSF4P23510 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
TNFSF4P23510 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TNFSF4P23510 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TNFSF4P23510 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TNFSF4P23510 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.08□□□□□ -1.92
TNFSF4P23510 RNU6-790P-201ENST00000384479 105 ntBASIC3.08□□□□□ -1.92
TNFSF4P23510 RNU1-57P-201ENST00000384491 166 ntBASIC3.08□□□□□ -1.92
TNFSF4P23510 MIR184-201ENST00000384962 84 ntBASIC3.08□□□□□ -1.92
TNFSF4P23510 MIR548F5-201ENST00000408421 86 ntBASIC3.08□□□□□ -1.92
TNFSF4P23510 RNU6-1140P-201ENST00000410517 106 ntBASIC3.08□□□□□ -1.92
TNFSF4P23510 RNU6-1328P-201ENST00000410938 106 ntBASIC3.08□□□□□ -1.92
TNFSF4P23510 CYCSP48-201ENST00000417124 323 ntBASIC3.08□□□□□ -1.92
TNFSF4P23510 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.08□□□□□ -1.92
TNFSF4P23510 RPL30P12-201ENST00000474666 353 ntBASIC3.08□□□□□ -1.92
TNFSF4P23510 RNU2-27P-201ENST00000516185 142 ntBASIC3.08□□□□□ -1.92
TNFSF4P23510 RNU1-54P-201ENST00000517181 120 ntBASIC3.08□□□□□ -1.92
TNFSF4P23510 AP005902.1-201ENST00000521358 186 ntBASIC3.08□□□□□ -1.92
TNFSF4P23510 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.08□□□□□ -1.92
TNFSF4P23510 AC115990.1-201ENST00000526957 301 ntBASIC3.08□□□□□ -1.92
TNFSF4P23510 HPRT1P3-201ENST00000539521 576 ntBASIC3.08□□□□□ -1.92
TNFSF4P23510 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.08□□□□□ -1.92
TNFSF4P23510 AC006077.1-201ENST00000604746 343 ntBASIC3.08□□□□□ -1.92
TNFSF4P23510 AC124303.1-201ENST00000605703 360 ntBASIC3.08□□□□□ -1.92
TNFSF4P23510 AC004832.5-201ENST00000608677 401 ntBASIC3.08□□□□□ -1.92
TNFSF4P23510 AL161423.1-201ENST00000613700 262 ntBASIC3.08□□□□□ -1.92
TNFSF4P23510 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
TNFSF4P23510 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.08□□□□□ -1.92
TNFSF4P23510 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
TNFSF4P23510 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.07□□□□□ -1.92
TNFSF4P23510 Y_RNA.151-201ENST00000363566 112 ntBASIC3.07□□□□□ -1.92
TNFSF4P23510 RNU6-1141P-201ENST00000364520 107 ntBASIC3.07□□□□□ -1.92
TNFSF4P23510 RNU6-593P-201ENST00000364716 112 ntBASIC3.07□□□□□ -1.92
TNFSF4P23510 Y_RNA.339-201ENST00000365325 102 ntBASIC3.07□□□□□ -1.92
TNFSF4P23510 MIR517A-201ENST00000385001 87 ntBASIC3.07□□□□□ -1.92
TNFSF4P23510 MIR218-2-201ENST00000385006 110 ntBASIC3.07□□□□□ -1.92
TNFSF4P23510 BTF3L4P2-201ENST00000392798 346 ntBASIC3.07□□□□□ -1.92
TNFSF4P23510 RN7SKP158-201ENST00000410453 326 ntBASIC3.07□□□□□ -1.92
TNFSF4P23510 RN7SKP27-201ENST00000410684 333 ntBASIC3.07□□□□□ -1.92
TNFSF4P23510 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.07□□□□□ -1.92
TNFSF4P23510 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.07□□□□□ -1.92
TNFSF4P23510 AC093019.1-201ENST00000443135 252 ntBASIC3.07□□□□□ -1.92
TNFSF4P23510 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.07□□□□□ -1.92
TNFSF4P23510 SNORA84-201ENST00000459229 133 ntBASIC3.07□□□□□ -1.92
TNFSF4P23510 snoU13.14-201ENST00000459372 104 ntBASIC3.07□□□□□ -1.92
TNFSF4P23510 AC096576.1-201ENST00000489014 359 ntBASIC3.07□□□□□ -1.92
TNFSF4P23510 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.07□□□□□ -1.92
TNFSF4P23510 AC026784.1-201ENST00000507986 352 ntBASIC3.07□□□□□ -1.92
TNFSF4P23510 RN7SKP282-201ENST00000516824 299 ntBASIC3.07□□□□□ -1.92
TNFSF4P23510 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.07□□□□□ -1.92
TNFSF4P23510 AC026403.1-201ENST00000518938 295 ntBASIC3.07□□□□□ -1.92
TNFSF4P23510 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.07□□□□□ -1.92
TNFSF4P23510 AC011611.1-201ENST00000552179 197 ntBASIC3.07□□□□□ -1.92
TNFSF4P23510 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.07□□□□□ -1.92
TNFSF4P23510 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.07□□□□□ -1.92
TNFSF4P23510 MIR3199-1-201ENST00000582434 88 ntBASIC3.07□□□□□ -1.92
TNFSF4P23510 AC019193.3-201ENST00000609144 554 ntBASIC3.07□□□□□ -1.92
TNFSF4P23510 MIR8076-201ENST00000611401 83 ntBASIC3.07□□□□□ -1.92
TNFSF4P23510 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.07□□□□□ -1.92
TNFSF4P23510 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
TNFSF4P23510 AC080128.1-201ENST00000474389 1917 ntBASIC3.07□□□□□ -1.92
TNFSF4P23510 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
TNFSF4P23510 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
TNFSF4P23510 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TNFSF4P23510 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TNFSF4P23510 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TNFSF4P23510 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
TNFSF4P23510 RNU6-212P-201ENST00000362642 104 ntBASIC3.06□□□□□ -1.92
TNFSF4P23510 RNU6-461P-201ENST00000364195 107 ntBASIC3.06□□□□□ -1.92
TNFSF4P23510 RNA5SP51-201ENST00000364750 119 ntBASIC3.06□□□□□ -1.92
TNFSF4P23510 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TNFSF4P23510 MIR627-201ENST00000384979 97 ntBASIC3.06□□□□□ -1.92
TNFSF4P23510 MIR186-201ENST00000384988 86 ntBASIC3.06□□□□□ -1.92
TNFSF4P23510 U6atac.2-201ENST00000408644 118 ntBASIC3.06□□□□□ -1.92
TNFSF4P23510 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.06□□□□□ -1.92
TNFSF4P23510 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.06□□□□□ -1.92
TNFSF4P23510 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.06□□□□□ -1.92
TNFSF4P23510 RPL31P12-201ENST00000422587 358 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms