Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CD44P16070 RNU6-778P-201ENST00000363269 103 ntBASIC5.83□□□□□ -1.48
CD44P16070 Y_RNA.360-201ENST00000365512 102 ntBASIC5.83□□□□□ -1.48
CD44P16070 SNORA18-201ENST00000384416 132 ntBASIC5.83□□□□□ -1.48
CD44P16070 SNORD77.3-201ENST00000391113 65 ntBASIC5.83□□□□□ -1.48
CD44P16070 Z98745.1-201ENST00000402553 494 ntBASIC5.83□□□□□ -1.48
CD44P16070 AL031121.1-201ENST00000406553 254 ntBASIC5.83□□□□□ -1.48
CD44P16070 RNU4-34P-201ENST00000410431 124 ntBASIC5.83□□□□□ -1.48
CD44P16070 RNU2-18P-201ENST00000411224 162 ntBASIC5.83□□□□□ -1.48
CD44P16070 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.83□□□□□ -1.48
CD44P16070 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.83□□□□□ -1.48
CD44P16070 RPL35AP21-201ENST00000437667 333 ntBASIC5.83□□□□□ -1.48
CD44P16070 AC245102.2-201ENST00000448956 180 ntBASIC5.83□□□□□ -1.48
CD44P16070 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.83□□□□□ -1.48
CD44P16070 MTND6P33-201ENST00000571794 183 ntBASIC5.83□□□□□ -1.48
CD44P16070 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.83□□□□□ -1.48
CD44P16070 AL034555.1-201ENST00000604816 211 ntBASIC5.83□□□□□ -1.48
CD44P16070 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CD44P16070 U7.4-201ENST00000614961 63 ntBASIC5.83□□□□□ -1.48
CD44P16070 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CD44P16070 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CD44P16070 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.83□□□□□ -1.48
CD44P16070 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.83□□□□□ -1.48
CD44P16070 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CD44P16070 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.83□□□□□ -1.48
CD44P16070 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CD44P16070 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CD44P16070 AC002543.1-201ENST00000299783 1954 ntBASIC5.82□□□□□ -1.48
CD44P16070 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.82□□□□□ -1.48
CD44P16070 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.82□□□□□ -1.48
CD44P16070 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CD44P16070 RNU6-349P-201ENST00000362402 107 ntBASIC5.82□□□□□ -1.48
CD44P16070 RNU4-13P-201ENST00000364019 141 ntBASIC5.82□□□□□ -1.48
CD44P16070 SNORD61-201ENST00000384252 73 ntBASIC5.82□□□□□ -1.48
CD44P16070 SNORA70E-201ENST00000384492 135 ntBASIC5.82□□□□□ -1.48
CD44P16070 RNU6-140P-201ENST00000384566 108 ntBASIC5.82□□□□□ -1.48
CD44P16070 AL590383.1-201ENST00000428602 75 ntBASIC5.82□□□□□ -1.48
CD44P16070 RNU7-164P-201ENST00000459221 62 ntBASIC5.82□□□□□ -1.48
CD44P16070 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.82□□□□□ -1.48
CD44P16070 RNU7-123P-201ENST00000515911 60 ntBASIC5.82□□□□□ -1.48
CD44P16070 RPL10P14-201ENST00000565265 298 ntBASIC5.82□□□□□ -1.48
CD44P16070 RN7SL708P-201ENST00000580952 299 ntBASIC5.82□□□□□ -1.48
CD44P16070 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.82□□□□□ -1.48
CD44P16070 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CD44P16070 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CD44P16070 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
CD44P16070 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CD44P16070 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CD44P16070 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.81□□□□□ -1.48
CD44P16070 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CD44P16070 RN7SKP153-201ENST00000365026 316 ntBASIC5.81□□□□□ -1.48
CD44P16070 U8.17-201ENST00000391292 132 ntBASIC5.81□□□□□ -1.48
CD44P16070 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.81□□□□□ -1.48
CD44P16070 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.81□□□□□ -1.48
CD44P16070 RNU6-1270P-201ENST00000517128 108 ntBASIC5.81□□□□□ -1.48
CD44P16070 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.81□□□□□ -1.48
CD44P16070 FAS-AS1.1-201ENST00000615327 126 ntBASIC5.81□□□□□ -1.48
CD44P16070 AL592437.2-201ENST00000421655 2434 ntBASIC5.81□□□□□ -1.48
CD44P16070 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CD44P16070 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.81□□□□□ -1.48
CD44P16070 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CD44P16070 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CD44P16070 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CD44P16070 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CD44P16070 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
CD44P16070 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CD44P16070 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CD44P16070 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CD44P16070 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CD44P16070 RNU6-600P-201ENST00000362524 99 ntBASIC5.8□□□□□ -1.48
CD44P16070 RNA5SP319-201ENST00000362768 119 ntBASIC5.8□□□□□ -1.48
CD44P16070 RNU6-888P-201ENST00000363010 101 ntBASIC5.8□□□□□ -1.48
CD44P16070 RNU1-77P-201ENST00000390868 162 ntBASIC5.8□□□□□ -1.48
CD44P16070 U3.32-201ENST00000408116 212 ntBASIC5.8□□□□□ -1.48
CD44P16070 RNA5SP487-201ENST00000410186 122 ntBASIC5.8□□□□□ -1.48
CD44P16070 RNA5SP511-201ENST00000410487 115 ntBASIC5.8□□□□□ -1.48
CD44P16070 CKS1BP5-201ENST00000434172 273 ntBASIC5.8□□□□□ -1.48
CD44P16070 AC080013.2-201ENST00000460866 323 ntBASIC5.8□□□□□ -1.48
CD44P16070 RN7SL51P-201ENST00000468230 285 ntBASIC5.8□□□□□ -1.48
CD44P16070 AC093270.2-201ENST00000486157 792 ntBASIC5.8□□□□□ -1.48
CD44P16070 RNU6-941P-201ENST00000516346 108 ntBASIC5.8□□□□□ -1.48
CD44P16070 RNU7-6P-201ENST00000516845 62 ntBASIC5.8□□□□□ -1.48
CD44P16070 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.8□□□□□ -1.48
CD44P16070 MIR3614-201ENST00000581261 86 ntBASIC5.8□□□□□ -1.48
CD44P16070 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.8□□□□□ -1.48
CD44P16070 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CD44P16070 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CD44P16070 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.8□□□□□ -1.48
CD44P16070 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CD44P16070 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CD44P16070 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CD44P16070 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CD44P16070 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CD44P16070 AC073346.2-201ENST00000624724 2058 ntBASIC5.79□□□□□ -1.48
CD44P16070 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CD44P16070 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CD44P16070 OR9K1P-202ENST00000641111 3217 ntBASIC5.79□□□□□ -1.48
CD44P16070 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CD44P16070 AC058791.1-201ENST00000608412 3198 ntBASIC5.79□□□□□ -1.48
CD44P16070 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms