Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC011753.3-201ENST00000443436 406 ntBASIC5.24□□□□□ -1.57
RNF40O75150 AC112498.1-201ENST00000444401 332 ntBASIC5.24□□□□□ -1.57
RNF40O75150 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.24□□□□□ -1.57
RNF40O75150 UQCRHP4-201ENST00000471686 272 ntBASIC5.24□□□□□ -1.57
RNF40O75150 RPS29P24-201ENST00000486345 171 ntBASIC5.24□□□□□ -1.57
RNF40O75150 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC5.24□□□□□ -1.57
RNF40O75150 COX6B1P5-201ENST00000509843 249 ntBASIC5.24□□□□□ -1.57
RNF40O75150 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.24□□□□□ -1.57
RNF40O75150 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.24□□□□□ -1.57
RNF40O75150 MIR4737-201ENST00000583979 81 ntBASIC5.24□□□□□ -1.57
RNF40O75150 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.24□□□□□ -1.57
RNF40O75150 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.24□□□□□ -1.57
RNF40O75150 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.24□□□□□ -1.57
RNF40O75150 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RNF40O75150 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RNF40O75150 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.24□□□□□ -1.57
RNF40O75150 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNF40O75150 AC008555.8-201ENST00000623602 2168 ntBASIC5.23□□□□□ -1.57
RNF40O75150 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF40O75150 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.23□□□□□ -1.57
RNF40O75150 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF40O75150 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF40O75150 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF40O75150 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNF40O75150 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF40O75150 RNU6-324P-201ENST00000363957 106 ntBASIC5.23□□□□□ -1.57
RNF40O75150 RNU6-1082P-201ENST00000364574 107 ntBASIC5.23□□□□□ -1.57
RNF40O75150 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
RNF40O75150 RNU6-629P-201ENST00000384061 103 ntBASIC5.23□□□□□ -1.57
RNF40O75150 SNORD116-21-201ENST00000384507 92 ntBASIC5.23□□□□□ -1.57
RNF40O75150 AL606845.1-201ENST00000404881 255 ntBASIC5.23□□□□□ -1.57
RNF40O75150 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF40O75150 AC078809.1-201ENST00000427601 140 ntBASIC5.23□□□□□ -1.57
RNF40O75150 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.23□□□□□ -1.57
RNF40O75150 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF40O75150 RPL23AP70-201ENST00000483361 460 ntBASIC5.23□□□□□ -1.57
RNF40O75150 AC146944.2-203ENST00000502493 354 ntBASIC5.23□□□□□ -1.57
RNF40O75150 AC139495.1-202ENST00000513164 354 ntBASIC5.23□□□□□ -1.57
RNF40O75150 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF40O75150 MED28P6-201ENST00000558776 231 ntBASIC5.23□□□□□ -1.57
RNF40O75150 LINC00933-203ENST00000559812 219 ntBASIC5.23□□□□□ -1.57
RNF40O75150 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF40O75150 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.23□□□□□ -1.57
RNF40O75150 AC008745.1-201ENST00000604064 271 ntBASIC5.23□□□□□ -1.57
RNF40O75150 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.23□□□□□ -1.57
RNF40O75150 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.23□□□□□ -1.57
RNF40O75150 AP000346.3-201ENST00000622821 210 ntBASIC5.23□□□□□ -1.57
RNF40O75150 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF40O75150 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.23□□□□□ -1.57
RNF40O75150 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.23□□□□□ -1.57
RNF40O75150 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF40O75150 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RNF40O75150 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC5.23□□□□□ -1.57
RNF40O75150 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.23□□□□□ -1.57
RNF40O75150 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF40O75150 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF40O75150 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RNF40O75150 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.22□□□□□ -1.57
RNF40O75150 MARK2P15-201ENST00000432204 2186 ntBASIC5.22□□□□□ -1.57
RNF40O75150 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RNF40O75150 AC118273.1-201ENST00000525324 3006 ntBASIC5.22□□□□□ -1.57
RNF40O75150 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
RNF40O75150 AC139713.2-215ENST00000641428 5037 ntBASIC5.22□□□□□ -1.57
RNF40O75150 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RNF40O75150 MIR450A1-201ENST00000362262 91 ntBASIC5.22□□□□□ -1.57
RNF40O75150 U3.9-201ENST00000363823 204 ntBASIC5.22□□□□□ -1.57
RNF40O75150 Y_RNA.368-201ENST00000365547 113 ntBASIC5.22□□□□□ -1.57
RNF40O75150 RNU6-1264P-201ENST00000383891 107 ntBASIC5.22□□□□□ -1.57
RNF40O75150 AL031003.1-201ENST00000404229 172 ntBASIC5.22□□□□□ -1.57
RNF40O75150 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RNF40O75150 RNA5SP475-201ENST00000410568 110 ntBASIC5.22□□□□□ -1.57
RNF40O75150 COX6CP13-201ENST00000428703 226 ntBASIC5.22□□□□□ -1.57
RNF40O75150 HMGB1P37-201ENST00000439613 609 ntBASIC5.22□□□□□ -1.57
RNF40O75150 AC009237.8-201ENST00000445492 379 ntBASIC5.22□□□□□ -1.57
RNF40O75150 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.22□□□□□ -1.57
RNF40O75150 RNA5SP291-201ENST00000517222 105 ntBASIC5.22□□□□□ -1.57
RNF40O75150 RNU4-60P-201ENST00000517239 135 ntBASIC5.22□□□□□ -1.57
RNF40O75150 AC134698.5-201ENST00000519444 336 ntBASIC5.22□□□□□ -1.57
RNF40O75150 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC5.22□□□□□ -1.57
RNF40O75150 Y_RNA.757-201ENST00000578934 114 ntBASIC5.22□□□□□ -1.57
RNF40O75150 MIR4697-201ENST00000582977 78 ntBASIC5.22□□□□□ -1.57
RNF40O75150 AC005255.1-201ENST00000593748 216 ntBASIC5.22□□□□□ -1.57
RNF40O75150 AC020895.1-201ENST00000595362 272 ntBASIC5.22□□□□□ -1.57
RNF40O75150 AL356575.1-201ENST00000603008 283 ntBASIC5.22□□□□□ -1.57
RNF40O75150 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.22□□□□□ -1.57
RNF40O75150 AP001005.3-201ENST00000622049 129 ntBASIC5.22□□□□□ -1.57
RNF40O75150 U2.21-201ENST00000637295 81 ntBASIC5.22□□□□□ -1.57
RNF40O75150 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.22□□□□□ -1.57
RNF40O75150 NOL8P1-201ENST00000508336 3529 ntBASIC5.22□□□□□ -1.57
RNF40O75150 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
RNF40O75150 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.21□□□□□ -1.57
RNF40O75150 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.21□□□□□ -1.57
RNF40O75150 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RNF40O75150 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
RNF40O75150 RNU6-597P-201ENST00000365620 102 ntBASIC5.21□□□□□ -1.58
RNF40O75150 RNU6-356P-201ENST00000384140 107 ntBASIC5.21□□□□□ -1.58
RNF40O75150 MIR544A-201ENST00000384855 91 ntBASIC5.21□□□□□ -1.58
RNF40O75150 MIR549A-201ENST00000385268 96 ntBASIC5.21□□□□□ -1.58
RNF40O75150 AL591034.1-201ENST00000407447 340 ntBASIC5.21□□□□□ -1.58
RNF40O75150 AC012306.1-201ENST00000423267 114 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms