Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 SNAP23P1-201ENST00000433229 246 ntBASIC3.54□□□□□ -1.84
PRPF3O43395 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.54□□□□□ -1.84
PRPF3O43395 IFNA20P-201ENST00000436840 528 ntBASIC3.54□□□□□ -1.84
PRPF3O43395 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.54□□□□□ -1.84
PRPF3O43395 AC092001.1-201ENST00000453012 261 ntBASIC3.54□□□□□ -1.84
PRPF3O43395 AC233279.1-201ENST00000455300 423 ntBASIC3.54□□□□□ -1.84
PRPF3O43395 RPS29P12-201ENST00000460178 152 ntBASIC3.54□□□□□ -1.84
PRPF3O43395 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.54□□□□□ -1.84
PRPF3O43395 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.54□□□□□ -1.84
PRPF3O43395 AC008885.1-201ENST00000514930 301 ntBASIC3.54□□□□□ -1.84
PRPF3O43395 SMURF2P1-201ENST00000514992 481 ntBASIC3.54□□□□□ -1.84
PRPF3O43395 RNU5F-8P-201ENST00000515941 111 ntBASIC3.54□□□□□ -1.84
PRPF3O43395 RNU5B-3P-201ENST00000516601 115 ntBASIC3.54□□□□□ -1.84
PRPF3O43395 SNORA43.2-201ENST00000516652 128 ntBASIC3.54□□□□□ -1.84
PRPF3O43395 AL670379.10-201ENST00000604330 253 ntBASIC3.54□□□□□ -1.84
PRPF3O43395 AL670379.9-201ENST00000605428 253 ntBASIC3.54□□□□□ -1.84
PRPF3O43395 AL121757.2-201ENST00000611223 313 ntBASIC3.54□□□□□ -1.84
PRPF3O43395 AL442067.2-201ENST00000614033 363 ntBASIC3.54□□□□□ -1.84
PRPF3O43395 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.54□□□□□ -1.84
PRPF3O43395 AL035425.3-201ENST00000564206 4996 ntBASIC3.54□□□□□ -1.84
PRPF3O43395 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PRPF3O43395 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PRPF3O43395 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.53□□□□□ -1.84
PRPF3O43395 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRPF3O43395 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PRPF3O43395 MTND4P12-201ENST00000498999 1377 ntBASIC3.53□□□□□ -1.84
PRPF3O43395 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRPF3O43395 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PRPF3O43395 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRPF3O43395 MIR148B-201ENST00000362252 99 ntBASIC3.53□□□□□ -1.84
PRPF3O43395 RNU6-845P-201ENST00000362578 103 ntBASIC3.53□□□□□ -1.84
PRPF3O43395 SNORA46-201ENST00000384762 135 ntBASIC3.53□□□□□ -1.84
PRPF3O43395 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.53□□□□□ -1.84
PRPF3O43395 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.53□□□□□ -1.84
PRPF3O43395 AC009969.1-201ENST00000438726 172 ntBASIC3.53□□□□□ -1.84
PRPF3O43395 USP9YP8-201ENST00000441913 500 ntBASIC3.53□□□□□ -1.84
PRPF3O43395 AC013470.1-201ENST00000453438 462 ntBASIC3.53□□□□□ -1.84
PRPF3O43395 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.53□□□□□ -1.84
PRPF3O43395 RNU7-66P-201ENST00000459469 62 ntBASIC3.53□□□□□ -1.84
PRPF3O43395 AC087884.1-201ENST00000469738 328 ntBASIC3.53□□□□□ -1.84
PRPF3O43395 AC117503.1-201ENST00000472241 394 ntBASIC3.53□□□□□ -1.84
PRPF3O43395 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.53□□□□□ -1.84
PRPF3O43395 RNU6-377P-201ENST00000515965 102 ntBASIC3.53□□□□□ -1.84
PRPF3O43395 RNU4-49P-201ENST00000516080 140 ntBASIC3.53□□□□□ -1.84
PRPF3O43395 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.53□□□□□ -1.84
PRPF3O43395 RNU6-864P-201ENST00000516256 108 ntBASIC3.53□□□□□ -1.84
PRPF3O43395 ACA59.2-201ENST00000517061 156 ntBASIC3.53□□□□□ -1.84
PRPF3O43395 SCARNA11.3-201ENST00000517276 130 ntBASIC3.53□□□□□ -1.84
PRPF3O43395 AP000889.2-201ENST00000532684 490 ntBASIC3.53□□□□□ -1.84
PRPF3O43395 AC096772.1-201ENST00000609146 564 ntBASIC3.53□□□□□ -1.84
PRPF3O43395 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.53□□□□□ -1.84
PRPF3O43395 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.53□□□□□ -1.84
PRPF3O43395 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRPF3O43395 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.53□□□□□ -1.84
PRPF3O43395 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRPF3O43395 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PRPF3O43395 MIR22-201ENST00000362190 85 ntBASIC3.52□□□□□ -1.85
PRPF3O43395 RNU6-942P-201ENST00000363002 107 ntBASIC3.52□□□□□ -1.85
PRPF3O43395 RNU6-831P-201ENST00000384548 107 ntBASIC3.52□□□□□ -1.85
PRPF3O43395 MIR147B-201ENST00000390185 80 ntBASIC3.52□□□□□ -1.85
PRPF3O43395 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.52□□□□□ -1.85
PRPF3O43395 MTND3P8-201ENST00000412909 339 ntBASIC3.52□□□□□ -1.85
PRPF3O43395 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.52□□□□□ -1.85
PRPF3O43395 ATG3P1-201ENST00000419507 911 ntBASIC3.52□□□□□ -1.85
PRPF3O43395 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.52□□□□□ -1.85
PRPF3O43395 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.52□□□□□ -1.85
PRPF3O43395 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.52□□□□□ -1.85
PRPF3O43395 MED28P2-201ENST00000475771 317 ntBASIC3.52□□□□□ -1.85
PRPF3O43395 MRPL42P6-201ENST00000486397 371 ntBASIC3.52□□□□□ -1.85
PRPF3O43395 MTCO1P29-201ENST00000496868 288 ntBASIC3.52□□□□□ -1.85
PRPF3O43395 AC091951.2-201ENST00000500762 203 ntBASIC3.52□□□□□ -1.85
PRPF3O43395 MTND4LP22-201ENST00000508209 276 ntBASIC3.52□□□□□ -1.85
PRPF3O43395 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.52□□□□□ -1.85
PRPF3O43395 RNU6-507P-201ENST00000516045 100 ntBASIC3.52□□□□□ -1.85
PRPF3O43395 RNU6-256P-201ENST00000516747 97 ntBASIC3.52□□□□□ -1.85
PRPF3O43395 RN7SKP57-201ENST00000517248 293 ntBASIC3.52□□□□□ -1.85
PRPF3O43395 AC245166.1-201ENST00000521012 253 ntBASIC3.52□□□□□ -1.85
PRPF3O43395 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.52□□□□□ -1.85
PRPF3O43395 AL133393.1-201ENST00000603277 287 ntBASIC3.52□□□□□ -1.85
PRPF3O43395 AC063943.3-201ENST00000615562 356 ntBASIC3.52□□□□□ -1.85
PRPF3O43395 UCA1.1-201ENST00000620952 75 ntBASIC3.52□□□□□ -1.85
PRPF3O43395 AC244517.12-201ENST00000623581 663 ntBASIC3.52□□□□□ -1.85
PRPF3O43395 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PRPF3O43395 MTND5P30-201ENST00000452896 1731 ntBASIC3.52□□□□□ -1.85
PRPF3O43395 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PRPF3O43395 RNU6-37P-201ENST00000362692 107 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 Y_RNA.70-201ENST00000362886 110 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 RNU6-78P-201ENST00000362897 107 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 Y_RNA.111-201ENST00000363248 100 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 RNU6-11P-201ENST00000364234 107 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 RNU6-7-201ENST00000364784 107 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 RNU6-8-201ENST00000365467 107 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 RNU6-25P-201ENST00000383873 107 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 RNU6-1-201ENST00000383898 107 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 RNU6-1083P-201ENST00000384022 107 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 RNU6-48P-201ENST00000384161 107 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 RNU6-36P-201ENST00000384172 107 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 RNU6-4P-201ENST00000384205 107 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 RNU6-5P-201ENST00000384238 107 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 RNU6-3P-201ENST00000384314 107 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms