Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC004975.1-201ENST00000428733 208 ntBASIC5.16□□□□□ -1.58
LHX6Q9UPM6 RNU1-88P-201ENST00000459274 128 ntBASIC5.16□□□□□ -1.58
LHX6Q9UPM6 AC011447.4-201ENST00000587562 111 ntBASIC5.16□□□□□ -1.58
LHX6Q9UPM6 uc_338.4-201ENST00000616635 176 ntBASIC5.16□□□□□ -1.58
LHX6Q9UPM6 5S_rRNA.11-201ENST00000618635 84 ntBASIC5.16□□□□□ -1.58
LHX6Q9UPM6 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.16□□□□□ -1.58
LHX6Q9UPM6 ASNSP1-201ENST00000518311 1939 ntBASIC5.16□□□□□ -1.58
LHX6Q9UPM6 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.16□□□□□ -1.58
LHX6Q9UPM6 AP004607.3-201ENST00000530354 3915 ntBASIC5.16□□□□□ -1.58
LHX6Q9UPM6 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.16□□□□□ -1.58
LHX6Q9UPM6 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.16□□□□□ -1.58
LHX6Q9UPM6 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.16□□□□□ -1.58
LHX6Q9UPM6 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.16□□□□□ -1.58
LHX6Q9UPM6 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.15□□□□□ -1.58
LHX6Q9UPM6 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
LHX6Q9UPM6 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
LHX6Q9UPM6 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
LHX6Q9UPM6 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
LHX6Q9UPM6 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
LHX6Q9UPM6 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
LHX6Q9UPM6 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LHX6Q9UPM6 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
LHX6Q9UPM6 MIR133B-201ENST00000362210 119 ntBASIC5.15□□□□□ -1.59
LHX6Q9UPM6 Y_RNA.107-201ENST00000363190 121 ntBASIC5.15□□□□□ -1.59
LHX6Q9UPM6 RNY1P1-201ENST00000364372 112 ntBASIC5.15□□□□□ -1.59
LHX6Q9UPM6 AL359837.1-201ENST00000381357 287 ntBASIC5.15□□□□□ -1.59
LHX6Q9UPM6 RNU6-217P-201ENST00000384164 104 ntBASIC5.15□□□□□ -1.59
LHX6Q9UPM6 MIR548B-201ENST00000385247 97 ntBASIC5.15□□□□□ -1.59
LHX6Q9UPM6 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
LHX6Q9UPM6 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.15□□□□□ -1.59
LHX6Q9UPM6 FTLP19-201ENST00000433300 394 ntBASIC5.15□□□□□ -1.59
LHX6Q9UPM6 AC108145.1-201ENST00000503770 153 ntBASIC5.15□□□□□ -1.59
LHX6Q9UPM6 AC141557.1-201ENST00000540982 400 ntBASIC5.15□□□□□ -1.59
LHX6Q9UPM6 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC5.15□□□□□ -1.59
LHX6Q9UPM6 EIF4A1P12-201ENST00000551910 141 ntBASIC5.15□□□□□ -1.59
LHX6Q9UPM6 AL034555.1-201ENST00000604816 211 ntBASIC5.15□□□□□ -1.59
LHX6Q9UPM6 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
LHX6Q9UPM6 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.15□□□□□ -1.59
LHX6Q9UPM6 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
LHX6Q9UPM6 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LHX6Q9UPM6 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
LHX6Q9UPM6 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
LHX6Q9UPM6 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.15□□□□□ -1.59
LHX6Q9UPM6 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LHX6Q9UPM6 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
LHX6Q9UPM6 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LHX6Q9UPM6 AC083843.2-201ENST00000568248 6253 ntBASIC5.14□□□□□ -1.59
LHX6Q9UPM6 MFSD8-216ENST00000641147 4009 ntBASIC5.14□□□□□ -1.59
LHX6Q9UPM6 MAPK10-328ENST00000641553 4009 ntBASIC5.14□□□□□ -1.59
LHX6Q9UPM6 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC5.14□□□□□ -1.59
LHX6Q9UPM6 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LHX6Q9UPM6 AC010266.2-201ENST00000564741 3255 ntBASIC5.14□□□□□ -1.59
LHX6Q9UPM6 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.14□□□□□ -1.59
LHX6Q9UPM6 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC5.14□□□□□ -1.59
LHX6Q9UPM6 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LHX6Q9UPM6 Y_RNA.198-201ENST00000364013 98 ntBASIC5.14□□□□□ -1.59
LHX6Q9UPM6 RNU6-1276P-201ENST00000365372 104 ntBASIC5.14□□□□□ -1.59
LHX6Q9UPM6 RNU6-242P-201ENST00000384359 107 ntBASIC5.14□□□□□ -1.59
LHX6Q9UPM6 MIR551A-201ENST00000385042 96 ntBASIC5.14□□□□□ -1.59
LHX6Q9UPM6 MIR325-201ENST00000385260 98 ntBASIC5.14□□□□□ -1.59
LHX6Q9UPM6 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.14□□□□□ -1.59
LHX6Q9UPM6 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC5.14□□□□□ -1.59
LHX6Q9UPM6 AC023449.1-201ENST00000454464 154 ntBASIC5.14□□□□□ -1.59
LHX6Q9UPM6 snoU13.1-201ENST00000459157 104 ntBASIC5.14□□□□□ -1.59
LHX6Q9UPM6 RN7SL41P-201ENST00000476144 297 ntBASIC5.14□□□□□ -1.59
LHX6Q9UPM6 AL451007.1-201ENST00000595491 289 ntBASIC5.14□□□□□ -1.59
LHX6Q9UPM6 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC5.14□□□□□ -1.59
LHX6Q9UPM6 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LHX6Q9UPM6 AC125257.1-201ENST00000560400 2930 ntBASIC5.14□□□□□ -1.59
LHX6Q9UPM6 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.14□□□□□ -1.59
LHX6Q9UPM6 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LHX6Q9UPM6 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LHX6Q9UPM6 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LHX6Q9UPM6 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LHX6Q9UPM6 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.14□□□□□ -1.59
LHX6Q9UPM6 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LHX6Q9UPM6 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LHX6Q9UPM6 AC005332.5-201ENST00000591222 2919 ntBASIC5.13□□□□□ -1.59
LHX6Q9UPM6 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.13□□□□□ -1.59
LHX6Q9UPM6 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.13□□□□□ -1.59
LHX6Q9UPM6 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.13□□□□□ -1.59
LHX6Q9UPM6 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LHX6Q9UPM6 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.13□□□□□ -1.59
LHX6Q9UPM6 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
LHX6Q9UPM6 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
LHX6Q9UPM6 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LHX6Q9UPM6 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LHX6Q9UPM6 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
LHX6Q9UPM6 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
LHX6Q9UPM6 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LHX6Q9UPM6 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.13□□□□□ -1.59
LHX6Q9UPM6 MIR130A-201ENST00000385274 89 ntBASIC5.13□□□□□ -1.59
LHX6Q9UPM6 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC5.13□□□□□ -1.59
LHX6Q9UPM6 AL591419.1-201ENST00000427423 339 ntBASIC5.13□□□□□ -1.59
LHX6Q9UPM6 AC083906.5-201ENST00000503722 328 ntBASIC5.13□□□□□ -1.59
LHX6Q9UPM6 RNU6-126P-201ENST00000516685 103 ntBASIC5.13□□□□□ -1.59
LHX6Q9UPM6 RNU2-44P-201ENST00000516795 194 ntBASIC5.13□□□□□ -1.59
LHX6Q9UPM6 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC5.13□□□□□ -1.59
LHX6Q9UPM6 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC5.13□□□□□ -1.59
LHX6Q9UPM6 AC126615.2-201ENST00000553003 515 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms