Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CD248Q9HCU0 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CD248Q9HCU0 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CD248Q9HCU0 AC110754.1-201ENST00000399740 601 ntBASIC3.91□□□□□ -1.78
CD248Q9HCU0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CD248Q9HCU0 RN7SKP53-201ENST00000411337 315 ntBASIC3.91□□□□□ -1.78
CD248Q9HCU0 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.91□□□□□ -1.78
CD248Q9HCU0 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.91□□□□□ -1.78
CD248Q9HCU0 OR2AQ1P-201ENST00000451972 200 ntBASIC3.91□□□□□ -1.78
CD248Q9HCU0 PCMTD1P1-201ENST00000455560 355 ntBASIC3.91□□□□□ -1.78
CD248Q9HCU0 PRELID3BP1-201ENST00000457142 540 ntBASIC3.91□□□□□ -1.78
CD248Q9HCU0 AC018437.1-201ENST00000492214 406 ntBASIC3.91□□□□□ -1.78
CD248Q9HCU0 Y_RNA.700-201ENST00000516806 100 ntBASIC3.91□□□□□ -1.78
CD248Q9HCU0 RNU7-4P-201ENST00000516961 62 ntBASIC3.91□□□□□ -1.78
CD248Q9HCU0 RNU6-570P-201ENST00000517051 105 ntBASIC3.91□□□□□ -1.78
CD248Q9HCU0 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.91□□□□□ -1.78
CD248Q9HCU0 CR383656.7-201ENST00000548164 174 ntBASIC3.91□□□□□ -1.78
CD248Q9HCU0 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.91□□□□□ -1.78
CD248Q9HCU0 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.91□□□□□ -1.78
CD248Q9HCU0 MIR4425-201ENST00000580572 84 ntBASIC3.91□□□□□ -1.78
CD248Q9HCU0 MIR5187-201ENST00000583479 76 ntBASIC3.91□□□□□ -1.78
CD248Q9HCU0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.91□□□□□ -1.78
CD248Q9HCU0 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.91□□□□□ -1.78
CD248Q9HCU0 AC012119.1-201ENST00000603184 222 ntBASIC3.91□□□□□ -1.78
CD248Q9HCU0 AL031176.1-201ENST00000604554 466 ntBASIC3.91□□□□□ -1.78
CD248Q9HCU0 AC002044.1-201ENST00000606707 158 ntBASIC3.91□□□□□ -1.78
CD248Q9HCU0 AC006329.2-201ENST00000611491 394 ntBASIC3.91□□□□□ -1.78
CD248Q9HCU0 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CD248Q9HCU0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CD248Q9HCU0 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CD248Q9HCU0 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CD248Q9HCU0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CD248Q9HCU0 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CD248Q9HCU0 MFSD8-236ENST00000641509 4050 ntBASIC3.9□□□□□ -1.78
CD248Q9HCU0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CD248Q9HCU0 ZNF826P-207ENST00000622273 1910 ntBASIC3.9□□□□□ -1.78
CD248Q9HCU0 RNU4-50P-201ENST00000364361 141 ntBASIC3.9□□□□□ -1.79
CD248Q9HCU0 RNA5SP97-201ENST00000365006 84 ntBASIC3.9□□□□□ -1.79
CD248Q9HCU0 RNU6-1329P-201ENST00000365664 107 ntBASIC3.9□□□□□ -1.79
CD248Q9HCU0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
CD248Q9HCU0 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.9□□□□□ -1.79
CD248Q9HCU0 SNORA51.11-201ENST00000384442 131 ntBASIC3.9□□□□□ -1.79
CD248Q9HCU0 RNU6-45P-201ENST00000384471 107 ntBASIC3.9□□□□□ -1.79
CD248Q9HCU0 Y_RNA.518-201ENST00000384552 113 ntBASIC3.9□□□□□ -1.79
CD248Q9HCU0 RPS15AP6-201ENST00000420703 385 ntBASIC3.9□□□□□ -1.79
CD248Q9HCU0 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.9□□□□□ -1.79
CD248Q9HCU0 AL133396.1-201ENST00000432048 687 ntBASIC3.9□□□□□ -1.79
CD248Q9HCU0 NEFMP1-201ENST00000443423 1006 ntBASIC3.9□□□□□ -1.79
CD248Q9HCU0 AC008264.1-201ENST00000447612 367 ntBASIC3.9□□□□□ -1.79
CD248Q9HCU0 FCF1P4-201ENST00000448326 183 ntBASIC3.9□□□□□ -1.79
CD248Q9HCU0 snoU109.4-201ENST00000458953 143 ntBASIC3.9□□□□□ -1.79
CD248Q9HCU0 MED28P2-201ENST00000475771 317 ntBASIC3.9□□□□□ -1.79
CD248Q9HCU0 RNU6-397P-201ENST00000516226 104 ntBASIC3.9□□□□□ -1.79
CD248Q9HCU0 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.9□□□□□ -1.79
CD248Q9HCU0 AC090517.1-201ENST00000569307 266 ntBASIC3.9□□□□□ -1.79
CD248Q9HCU0 MIR4738-201ENST00000579134 87 ntBASIC3.9□□□□□ -1.79
CD248Q9HCU0 AC012433.1-201ENST00000588916 398 ntBASIC3.9□□□□□ -1.79
CD248Q9HCU0 AC012468.1-201ENST00000604888 430 ntBASIC3.9□□□□□ -1.79
CD248Q9HCU0 AC130454.1-201ENST00000622948 401 ntBASIC3.9□□□□□ -1.79
CD248Q9HCU0 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CD248Q9HCU0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CD248Q9HCU0 AC103988.1-201ENST00000566382 2177 ntBASIC3.9□□□□□ -1.79
CD248Q9HCU0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
CD248Q9HCU0 Y_RNA.180-201ENST00000363867 113 ntBASIC3.89□□□□□ -1.79
CD248Q9HCU0 RNY3P11-201ENST00000364153 102 ntBASIC3.89□□□□□ -1.79
CD248Q9HCU0 Y_RNA.480-201ENST00000384364 102 ntBASIC3.89□□□□□ -1.79
CD248Q9HCU0 MIR7-3-201ENST00000384898 110 ntBASIC3.89□□□□□ -1.79
CD248Q9HCU0 SNORA11.1-201ENST00000408133 129 ntBASIC3.89□□□□□ -1.79
CD248Q9HCU0 AC092809.3-201ENST00000415453 231 ntBASIC3.89□□□□□ -1.79
CD248Q9HCU0 AL121871.1-201ENST00000443413 436 ntBASIC3.89□□□□□ -1.79
CD248Q9HCU0 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.89□□□□□ -1.79
CD248Q9HCU0 RPL21P11-201ENST00000461458 483 ntBASIC3.89□□□□□ -1.79
CD248Q9HCU0 TRBVB-201ENST00000477100 408 ntBASIC3.89□□□□□ -1.79
CD248Q9HCU0 RPL31P60-201ENST00000478450 367 ntBASIC3.89□□□□□ -1.79
CD248Q9HCU0 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.89□□□□□ -1.79
CD248Q9HCU0 RNU6-390P-201ENST00000516259 103 ntBASIC3.89□□□□□ -1.79
CD248Q9HCU0 RNU6-677P-201ENST00000516914 101 ntBASIC3.89□□□□□ -1.79
CD248Q9HCU0 SNORA81.3-201ENST00000517283 198 ntBASIC3.89□□□□□ -1.79
CD248Q9HCU0 AC069113.1-201ENST00000517763 267 ntBASIC3.89□□□□□ -1.79
CD248Q9HCU0 AC104576.1-201ENST00000524225 88 ntBASIC3.89□□□□□ -1.79
CD248Q9HCU0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.89□□□□□ -1.79
CD248Q9HCU0 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.89□□□□□ -1.79
CD248Q9HCU0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.89□□□□□ -1.79
CD248Q9HCU0 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.89□□□□□ -1.79
CD248Q9HCU0 VN1R91P-201ENST00000594377 169 ntBASIC3.89□□□□□ -1.79
CD248Q9HCU0 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.89□□□□□ -1.79
CD248Q9HCU0 AC104763.2-201ENST00000604179 382 ntBASIC3.89□□□□□ -1.79
CD248Q9HCU0 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.89□□□□□ -1.79
CD248Q9HCU0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.89□□□□□ -1.79
CD248Q9HCU0 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CD248Q9HCU0 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CD248Q9HCU0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CD248Q9HCU0 MAPK10-373ENST00000641983 6772 ntBASIC3.88□□□□□ -1.79
CD248Q9HCU0 AL079305.1-201ENST00000623159 3008 ntBASIC3.88□□□□□ -1.79
CD248Q9HCU0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CD248Q9HCU0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
CD248Q9HCU0 Y_RNA.333-201ENST00000365274 102 ntBASIC3.88□□□□□ -1.79
CD248Q9HCU0 RNU6-596P-201ENST00000365395 98 ntBASIC3.88□□□□□ -1.79
CD248Q9HCU0 MIR183-201ENST00000384958 110 ntBASIC3.88□□□□□ -1.79
CD248Q9HCU0 MIR625-201ENST00000385047 85 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 195.2 ms