Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
LRCH3Q96II8 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
LRCH3Q96II8 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRCH3Q96II8 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LRCH3Q96II8 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRCH3Q96II8 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRCH3Q96II8 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRCH3Q96II8 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LRCH3Q96II8 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRCH3Q96II8 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
LRCH3Q96II8 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LRCH3Q96II8 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRCH3Q96II8 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
LRCH3Q96II8 MIR372-201ENST00000362225 67 ntBASIC5.24□□□□□ -1.57
LRCH3Q96II8 RNA5SP173-201ENST00000364857 136 ntBASIC5.24□□□□□ -1.57
LRCH3Q96II8 Y_RNA.368-201ENST00000365547 113 ntBASIC5.24□□□□□ -1.57
LRCH3Q96II8 RNU6-1264P-201ENST00000383891 107 ntBASIC5.24□□□□□ -1.57
LRCH3Q96II8 SNORD72-201ENST00000390994 80 ntBASIC5.24□□□□□ -1.57
LRCH3Q96II8 PPIAP31-201ENST00000405422 495 ntBASIC5.24□□□□□ -1.57
LRCH3Q96II8 RNU6-710P-201ENST00000410424 105 ntBASIC5.24□□□□□ -1.57
LRCH3Q96II8 HMGN2P27-201ENST00000427352 270 ntBASIC5.24□□□□□ -1.57
LRCH3Q96II8 AC009237.8-201ENST00000445492 379 ntBASIC5.24□□□□□ -1.57
LRCH3Q96II8 AC007215.1-201ENST00000464893 276 ntBASIC5.24□□□□□ -1.57
LRCH3Q96II8 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.24□□□□□ -1.57
LRCH3Q96II8 RN7SL176P-201ENST00000580352 264 ntBASIC5.24□□□□□ -1.57
LRCH3Q96II8 AL031274.2-201ENST00000599419 203 ntBASIC5.24□□□□□ -1.57
LRCH3Q96II8 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRCH3Q96II8 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRCH3Q96II8 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.24□□□□□ -1.57
LRCH3Q96II8 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC5.24□□□□□ -1.57
LRCH3Q96II8 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
LRCH3Q96II8 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.23□□□□□ -1.57
LRCH3Q96II8 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.23□□□□□ -1.57
LRCH3Q96II8 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.23□□□□□ -1.57
LRCH3Q96II8 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LRCH3Q96II8 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
LRCH3Q96II8 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LRCH3Q96II8 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LRCH3Q96II8 MIR367-201ENST00000362299 68 ntBASIC5.23□□□□□ -1.57
LRCH3Q96II8 Y_RNA.120-201ENST00000363304 110 ntBASIC5.23□□□□□ -1.57
LRCH3Q96II8 RNA5SP283-201ENST00000365604 119 ntBASIC5.23□□□□□ -1.57
LRCH3Q96II8 SNORA70.10-201ENST00000384515 134 ntBASIC5.23□□□□□ -1.57
LRCH3Q96II8 RNU6-855P-201ENST00000410395 104 ntBASIC5.23□□□□□ -1.57
LRCH3Q96II8 Y_RNA.617-201ENST00000410920 90 ntBASIC5.23□□□□□ -1.57
LRCH3Q96II8 AC114755.2-201ENST00000413520 361 ntBASIC5.23□□□□□ -1.57
LRCH3Q96II8 AC012306.1-201ENST00000423267 114 ntBASIC5.23□□□□□ -1.57
LRCH3Q96II8 RPL7AP49-201ENST00000429522 581 ntBASIC5.23□□□□□ -1.57
LRCH3Q96II8 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.23□□□□□ -1.57
LRCH3Q96II8 AC245047.4-201ENST00000433189 144 ntBASIC5.23□□□□□ -1.57
LRCH3Q96II8 AL591438.1-201ENST00000433508 581 ntBASIC5.23□□□□□ -1.57
LRCH3Q96II8 RNU6-781P-201ENST00000516377 101 ntBASIC5.23□□□□□ -1.57
LRCH3Q96II8 AC062037.1-201ENST00000605302 128 ntBASIC5.23□□□□□ -1.57
LRCH3Q96II8 AC090132.2-201ENST00000615881 347 ntBASIC5.23□□□□□ -1.57
LRCH3Q96II8 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC5.23□□□□□ -1.57
LRCH3Q96II8 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
LRCH3Q96II8 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
LRCH3Q96II8 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
LRCH3Q96II8 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LRCH3Q96II8 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
LRCH3Q96II8 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC5.22□□□□□ -1.57
LRCH3Q96II8 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRCH3Q96II8 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRCH3Q96II8 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.22□□□□□ -1.57
LRCH3Q96II8 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.22□□□□□ -1.57
LRCH3Q96II8 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LRCH3Q96II8 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LRCH3Q96II8 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRCH3Q96II8 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRCH3Q96II8 AC092268.1-201ENST00000342691 405 ntBASIC5.22□□□□□ -1.57
LRCH3Q96II8 RPS29P17-201ENST00000430795 166 ntBASIC5.22□□□□□ -1.57
LRCH3Q96II8 SNRPEP9-201ENST00000436794 238 ntBASIC5.22□□□□□ -1.57
LRCH3Q96II8 HMGB1P37-201ENST00000439613 609 ntBASIC5.22□□□□□ -1.57
LRCH3Q96II8 RPS26P45-201ENST00000471748 340 ntBASIC5.22□□□□□ -1.57
LRCH3Q96II8 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.22□□□□□ -1.57
LRCH3Q96II8 LINC00933-203ENST00000559812 219 ntBASIC5.22□□□□□ -1.57
LRCH3Q96II8 MIR3200-201ENST00000580767 85 ntBASIC5.22□□□□□ -1.57
LRCH3Q96II8 AC015813.4-201ENST00000610469 179 ntBASIC5.22□□□□□ -1.57
LRCH3Q96II8 TEX41-243ENST00000614173 190 ntTSL 5 BASIC5.22□□□□□ -1.57
LRCH3Q96II8 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.22□□□□□ -1.57
LRCH3Q96II8 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LRCH3Q96II8 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LRCH3Q96II8 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRCH3Q96II8 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LRCH3Q96II8 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.21□□□□□ -1.57
LRCH3Q96II8 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
LRCH3Q96II8 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRCH3Q96II8 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRCH3Q96II8 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.21□□□□□ -1.58
LRCH3Q96II8 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRCH3Q96II8 RNU1-62P-201ENST00000362599 164 ntBASIC5.21□□□□□ -1.58
LRCH3Q96II8 Y_RNA.341-201ENST00000365341 102 ntBASIC5.21□□□□□ -1.58
LRCH3Q96II8 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.21□□□□□ -1.58
LRCH3Q96II8 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC5.21□□□□□ -1.58
LRCH3Q96II8 AC078809.1-201ENST00000427601 140 ntBASIC5.21□□□□□ -1.58
LRCH3Q96II8 RPL19P16-201ENST00000433839 588 ntBASIC5.21□□□□□ -1.58
LRCH3Q96II8 GOT2P5-201ENST00000433995 546 ntBASIC5.21□□□□□ -1.58
LRCH3Q96II8 AC015795.1-201ENST00000513669 327 ntBASIC5.21□□□□□ -1.58
LRCH3Q96II8 SNORA74D-201ENST00000516404 141 ntBASIC5.21□□□□□ -1.58
LRCH3Q96II8 RNA5SP291-201ENST00000517222 105 ntBASIC5.21□□□□□ -1.58
LRCH3Q96II8 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 196.6 ms