Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 ARF4P1-201ENST00000605447 541 ntBASIC4.23□□□□□ -1.73
PHC3Q8NDX5 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.23□□□□□ -1.73
PHC3Q8NDX5 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.23□□□□□ -1.73
PHC3Q8NDX5 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
PHC3Q8NDX5 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PHC3Q8NDX5 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PHC3Q8NDX5 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PHC3Q8NDX5 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
PHC3Q8NDX5 MIR423-201ENST00000362201 94 ntBASIC4.22□□□□□ -1.73
PHC3Q8NDX5 RNU6-858P-201ENST00000362436 107 ntBASIC4.22□□□□□ -1.73
PHC3Q8NDX5 RNA5SP388-201ENST00000362584 119 ntBASIC4.22□□□□□ -1.73
PHC3Q8NDX5 RN7SKP280-201ENST00000364196 304 ntBASIC4.22□□□□□ -1.73
PHC3Q8NDX5 RNU6-806P-201ENST00000365147 105 ntBASIC4.22□□□□□ -1.73
PHC3Q8NDX5 RNU6-1280P-201ENST00000365211 107 ntBASIC4.22□□□□□ -1.73
PHC3Q8NDX5 SNORA62-201ENST00000365493 153 ntBASIC4.22□□□□□ -1.73
PHC3Q8NDX5 RNU6-1286P-201ENST00000383871 107 ntBASIC4.22□□□□□ -1.73
PHC3Q8NDX5 MIR1179-201ENST00000408703 91 ntBASIC4.22□□□□□ -1.73
PHC3Q8NDX5 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.22□□□□□ -1.73
PHC3Q8NDX5 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.22□□□□□ -1.73
PHC3Q8NDX5 RPL23AP81-201ENST00000455252 467 ntBASIC4.22□□□□□ -1.73
PHC3Q8NDX5 LINC01399-202ENST00000458450 244 ntBASIC4.22□□□□□ -1.73
PHC3Q8NDX5 RNA5SP310-201ENST00000459084 116 ntBASIC4.22□□□□□ -1.73
PHC3Q8NDX5 TOMM22P6-201ENST00000465035 409 ntBASIC4.22□□□□□ -1.73
PHC3Q8NDX5 SNRPGP3-201ENST00000469405 227 ntBASIC4.22□□□□□ -1.73
PHC3Q8NDX5 RPS27AP10-201ENST00000496103 208 ntBASIC4.22□□□□□ -1.73
PHC3Q8NDX5 RN7SKP272-201ENST00000516988 232 ntBASIC4.22□□□□□ -1.73
PHC3Q8NDX5 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.22□□□□□ -1.73
PHC3Q8NDX5 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.22□□□□□ -1.73
PHC3Q8NDX5 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.22□□□□□ -1.73
PHC3Q8NDX5 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.22□□□□□ -1.73
PHC3Q8NDX5 MIR432-201ENST00000606207 94 ntBASIC4.22□□□□□ -1.73
PHC3Q8NDX5 FAM27D1-201ENST00000612308 341 ntBASIC4.22□□□□□ -1.73
PHC3Q8NDX5 AC073308.1-201ENST00000623696 305 ntBASIC4.22□□□□□ -1.73
PHC3Q8NDX5 AC048347.1-201ENST00000624621 427 ntBASIC4.22□□□□□ -1.73
PHC3Q8NDX5 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PHC3Q8NDX5 AC010733.2-201ENST00000589496 5702 ntBASIC4.22□□□□□ -1.73
PHC3Q8NDX5 AC007656.2-201ENST00000624902 4547 ntBASIC4.22□□□□□ -1.73
PHC3Q8NDX5 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
PHC3Q8NDX5 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
PHC3Q8NDX5 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.73
PHC3Q8NDX5 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.21□□□□□ -1.74
PHC3Q8NDX5 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PHC3Q8NDX5 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PHC3Q8NDX5 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PHC3Q8NDX5 Y_RNA.26-201ENST00000362539 101 ntBASIC4.21□□□□□ -1.74
PHC3Q8NDX5 RNU6-142P-201ENST00000384019 107 ntBASIC4.21□□□□□ -1.74
PHC3Q8NDX5 RNY3P4-201ENST00000384428 101 ntBASIC4.21□□□□□ -1.74
PHC3Q8NDX5 RNU1-89P-201ENST00000384592 164 ntBASIC4.21□□□□□ -1.74
PHC3Q8NDX5 SNORD66.1-201ENST00000391230 76 ntBASIC4.21□□□□□ -1.74
PHC3Q8NDX5 RNA5SP36-201ENST00000410197 133 ntBASIC4.21□□□□□ -1.74
PHC3Q8NDX5 AC009310.1-201ENST00000414414 451 ntBASIC4.21□□□□□ -1.74
PHC3Q8NDX5 AP000907.1-201ENST00000428428 510 ntBASIC4.21□□□□□ -1.74
PHC3Q8NDX5 AC091286.1-201ENST00000431233 461 ntBASIC4.21□□□□□ -1.74
PHC3Q8NDX5 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.21□□□□□ -1.74
PHC3Q8NDX5 CYCSP32-201ENST00000440548 321 ntBASIC4.21□□□□□ -1.74
PHC3Q8NDX5 AC009296.1-201ENST00000443146 155 ntBASIC4.21□□□□□ -1.74
PHC3Q8NDX5 AC012308.1-201ENST00000451232 178 ntBASIC4.21□□□□□ -1.74
PHC3Q8NDX5 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.21□□□□□ -1.74
PHC3Q8NDX5 TRBVB-201ENST00000477100 408 ntBASIC4.21□□□□□ -1.74
PHC3Q8NDX5 AC067942.3-201ENST00000512025 362 ntBASIC4.21□□□□□ -1.74
PHC3Q8NDX5 RNU6-928P-201ENST00000516876 104 ntBASIC4.21□□□□□ -1.74
PHC3Q8NDX5 RNU6-570P-201ENST00000517051 105 ntBASIC4.21□□□□□ -1.74
PHC3Q8NDX5 CR383656.8-201ENST00000549046 145 ntBASIC4.21□□□□□ -1.74
PHC3Q8NDX5 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.21□□□□□ -1.74
PHC3Q8NDX5 MIR3939-201ENST00000582614 106 ntBASIC4.21□□□□□ -1.74
PHC3Q8NDX5 AL451007.1-201ENST00000595491 289 ntBASIC4.21□□□□□ -1.74
PHC3Q8NDX5 AC019159.1-201ENST00000605094 187 ntBASIC4.21□□□□□ -1.74
PHC3Q8NDX5 AC011373.1-201ENST00000607270 237 ntBASIC4.21□□□□□ -1.74
PHC3Q8NDX5 RMST_6.1-201ENST00000611980 203 ntBASIC4.21□□□□□ -1.74
PHC3Q8NDX5 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.21□□□□□ -1.74
PHC3Q8NDX5 MIR6810-201ENST00000622701 70 ntBASIC4.21□□□□□ -1.74
PHC3Q8NDX5 AC091903.1-201ENST00000624322 454 ntBASIC4.21□□□□□ -1.74
PHC3Q8NDX5 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PHC3Q8NDX5 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PHC3Q8NDX5 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
PHC3Q8NDX5 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.21□□□□□ -1.74
PHC3Q8NDX5 RLIMP1-201ENST00000339626 1680 ntBASIC4.2□□□□□ -1.74
PHC3Q8NDX5 AL353743.1-202ENST00000431724 1695 ntBASIC4.2□□□□□ -1.74
PHC3Q8NDX5 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PHC3Q8NDX5 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.2□□□□□ -1.74
PHC3Q8NDX5 Y_RNA.14-201ENST00000362415 103 ntBASIC4.2□□□□□ -1.74
PHC3Q8NDX5 RNU6-212P-201ENST00000362642 104 ntBASIC4.2□□□□□ -1.74
PHC3Q8NDX5 SNORD56.1-201ENST00000362913 68 ntBASIC4.2□□□□□ -1.74
PHC3Q8NDX5 RNA5SP515-201ENST00000364570 118 ntBASIC4.2□□□□□ -1.74
PHC3Q8NDX5 Y_RNA.439-201ENST00000384119 94 ntBASIC4.2□□□□□ -1.74
PHC3Q8NDX5 Y_RNA.458-201ENST00000384240 102 ntBASIC4.2□□□□□ -1.74
PHC3Q8NDX5 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.2□□□□□ -1.74
PHC3Q8NDX5 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.2□□□□□ -1.74
PHC3Q8NDX5 RPL23AP22-201ENST00000437556 453 ntBASIC4.2□□□□□ -1.74
PHC3Q8NDX5 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.2□□□□□ -1.74
PHC3Q8NDX5 RPL39P38-201ENST00000467018 153 ntBASIC4.2□□□□□ -1.74
PHC3Q8NDX5 AC109327.1-201ENST00000471666 403 ntBASIC4.2□□□□□ -1.74
PHC3Q8NDX5 AC105137.1-201ENST00000484355 562 ntBASIC4.2□□□□□ -1.74
PHC3Q8NDX5 MRPL42P6-201ENST00000486397 371 ntBASIC4.2□□□□□ -1.74
PHC3Q8NDX5 RPL23AP75-201ENST00000491601 451 ntBASIC4.2□□□□□ -1.74
PHC3Q8NDX5 RNA5SP49-201ENST00000516450 115 ntBASIC4.2□□□□□ -1.74
PHC3Q8NDX5 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.2□□□□□ -1.74
PHC3Q8NDX5 MRPS36P4-201ENST00000534436 298 ntBASIC4.2□□□□□ -1.74
PHC3Q8NDX5 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PHC3Q8NDX5 AP002770.2-201ENST00000543613 532 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms