Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 RNA5SP428-201ENST00000365129 132 ntBASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 RNU1-73P-201ENST00000383971 164 ntBASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 RNU6-643P-201ENST00000384018 107 ntBASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 AL357515.1-201ENST00000402967 542 ntBASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 AC093162.1-201ENST00000419682 124 ntBASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 RPS27P18-201ENST00000431701 247 ntBASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 RPL37P4-201ENST00000448908 268 ntBASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 AC245047.8-201ENST00000456455 284 ntBASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 AL591473.1-201ENST00000464297 313 ntBASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 RN7SL319P-201ENST00000480656 221 ntBASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 RPL23AP53-201ENST00000521854 457 ntBASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 AC005868.1-201ENST00000536421 331 ntBASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 AC090049.2-201ENST00000550377 109 ntBASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 MIR4691-201ENST00000583764 85 ntBASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 AC006254.2-201ENST00000603259 279 ntBASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 MIR6719-201ENST00000622428 87 ntBASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC116Q8IYX3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.65□□□□□ -1.66
CCDC116Q8IYX3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
CCDC116Q8IYX3 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.65□□□□□ -1.66
CCDC116Q8IYX3 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC116Q8IYX3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.65□□□□□ -1.66
CCDC116Q8IYX3 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.65□□□□□ -1.66
CCDC116Q8IYX3 AL133383.2-201ENST00000622958 2336 ntBASIC4.65□□□□□ -1.66
CCDC116Q8IYX3 RNU1-62P-201ENST00000362599 164 ntBASIC4.65□□□□□ -1.67
CCDC116Q8IYX3 RNU6-1048P-201ENST00000364054 107 ntBASIC4.65□□□□□ -1.67
CCDC116Q8IYX3 RNU6-454P-201ENST00000364292 107 ntBASIC4.65□□□□□ -1.67
CCDC116Q8IYX3 RNU6-1180P-201ENST00000364935 107 ntBASIC4.65□□□□□ -1.67
CCDC116Q8IYX3 SNORA72.4-201ENST00000384174 132 ntBASIC4.65□□□□□ -1.67
CCDC116Q8IYX3 MIR765-201ENST00000390226 114 ntBASIC4.65□□□□□ -1.67
CCDC116Q8IYX3 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CCDC116Q8IYX3 RPL23AP48-201ENST00000406913 488 ntBASIC4.65□□□□□ -1.67
CCDC116Q8IYX3 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC116Q8IYX3 HMGN2P30-201ENST00000423237 256 ntBASIC4.65□□□□□ -1.67
CCDC116Q8IYX3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC116Q8IYX3 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC116Q8IYX3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC116Q8IYX3 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC116Q8IYX3 CKS1BP7-201ENST00000522230 235 ntBASIC4.65□□□□□ -1.67
CCDC116Q8IYX3 MIR3646-201ENST00000578301 84 ntBASIC4.65□□□□□ -1.67
CCDC116Q8IYX3 AL356575.1-201ENST00000603008 283 ntBASIC4.65□□□□□ -1.67
CCDC116Q8IYX3 AL391903.3-201ENST00000612158 163 ntBASIC4.65□□□□□ -1.67
CCDC116Q8IYX3 AL391261.4-201ENST00000616012 481 ntBASIC4.65□□□□□ -1.67
CCDC116Q8IYX3 AC019206.1-201ENST00000621938 425 ntBASIC4.65□□□□□ -1.67
CCDC116Q8IYX3 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC116Q8IYX3 MIR6844-201ENST00000637122 62 ntBASIC4.65□□□□□ -1.67
CCDC116Q8IYX3 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC116Q8IYX3 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC116Q8IYX3 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC116Q8IYX3 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC116Q8IYX3 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC116Q8IYX3 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC116Q8IYX3 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.64□□□□□ -1.67
CCDC116Q8IYX3 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC116Q8IYX3 MAPK10-286ENST00000641208 8747 ntBASIC4.64□□□□□ -1.67
CCDC116Q8IYX3 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC116Q8IYX3 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC116Q8IYX3 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC116Q8IYX3 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC116Q8IYX3 AC126755.2-208ENST00000327792 462 ntBASIC4.64□□□□□ -1.67
CCDC116Q8IYX3 AC138969.1-213ENST00000331436 462 ntBASIC4.64□□□□□ -1.67
CCDC116Q8IYX3 SNORA58B-201ENST00000364259 136 ntBASIC4.64□□□□□ -1.67
CCDC116Q8IYX3 RNU6-1264P-201ENST00000383891 107 ntBASIC4.64□□□□□ -1.67
CCDC116Q8IYX3 RNU6-969P-201ENST00000383900 105 ntBASIC4.64□□□□□ -1.67
CCDC116Q8IYX3 SNORA22-201ENST00000383907 134 ntBASIC4.64□□□□□ -1.67
CCDC116Q8IYX3 AL355497.1-201ENST00000406262 551 ntBASIC4.64□□□□□ -1.67
CCDC116Q8IYX3 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.64□□□□□ -1.67
CCDC116Q8IYX3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC116Q8IYX3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC116Q8IYX3 AC006517.1-201ENST00000480485 328 ntBASIC4.64□□□□□ -1.67
CCDC116Q8IYX3 RPS4XP13-201ENST00000483219 789 ntBASIC4.64□□□□□ -1.67
CCDC116Q8IYX3 RNU6-589P-201ENST00000516485 107 ntBASIC4.64□□□□□ -1.67
CCDC116Q8IYX3 SNORA31.16-201ENST00000516773 139 ntBASIC4.64□□□□□ -1.67
CCDC116Q8IYX3 MTND5P34-201ENST00000568888 325 ntBASIC4.64□□□□□ -1.67
CCDC116Q8IYX3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
CCDC116Q8IYX3 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC116Q8IYX3 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC116Q8IYX3 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC116Q8IYX3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC116Q8IYX3 ZNF702P-202ENST00000434269 1966 ntBASIC4.64□□□□□ -1.67
CCDC116Q8IYX3 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 MTND5P32-201ENST00000560711 1802 ntBASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC116Q8IYX3 SNORA18.3-201ENST00000384122 132 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms