Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 RNU6-880P-201ENST00000384526 107 ntBASIC5.03□□□□□ -1.6
CTC1Q2NKJ3 RNU6-19P-201ENST00000384718 107 ntBASIC5.03□□□□□ -1.6
CTC1Q2NKJ3 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.03□□□□□ -1.6
CTC1Q2NKJ3 RNU6-592P-201ENST00000411333 103 ntBASIC5.03□□□□□ -1.6
CTC1Q2NKJ3 AC004386.2-201ENST00000441858 148 ntBASIC5.03□□□□□ -1.6
CTC1Q2NKJ3 TDGF1P1-201ENST00000445734 527 ntBASIC5.03□□□□□ -1.6
CTC1Q2NKJ3 AC109327.2-201ENST00000448339 378 ntBASIC5.03□□□□□ -1.6
CTC1Q2NKJ3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC5.03□□□□□ -1.6
CTC1Q2NKJ3 AC091167.1-201ENST00000492017 396 ntBASIC5.03□□□□□ -1.6
CTC1Q2NKJ3 AC091868.1-201ENST00000508746 304 ntBASIC5.03□□□□□ -1.6
CTC1Q2NKJ3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CTC1Q2NKJ3 RN7SKP46-201ENST00000515942 234 ntBASIC5.03□□□□□ -1.6
CTC1Q2NKJ3 RNU6-561P-201ENST00000516222 102 ntBASIC5.03□□□□□ -1.6
CTC1Q2NKJ3 RNU1-6P-201ENST00000516290 144 ntBASIC5.03□□□□□ -1.6
CTC1Q2NKJ3 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.03□□□□□ -1.6
CTC1Q2NKJ3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.03□□□□□ -1.6
CTC1Q2NKJ3 AC004832.5-201ENST00000608677 401 ntBASIC5.03□□□□□ -1.6
CTC1Q2NKJ3 ZYXP1-201ENST00000617638 118 ntBASIC5.03□□□□□ -1.6
CTC1Q2NKJ3 AC034229.5-201ENST00000624258 185 ntBASIC5.03□□□□□ -1.6
CTC1Q2NKJ3 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CTC1Q2NKJ3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CTC1Q2NKJ3 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CTC1Q2NKJ3 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CTC1Q2NKJ3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CTC1Q2NKJ3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CTC1Q2NKJ3 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 NEAT1-202ENST00000501122 22743 ntBASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 RNU6-106P-201ENST00000384405 107 ntBASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 SNORD72-201ENST00000390994 80 ntBASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 AL627311.1-201ENST00000431514 115 ntBASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 AL158147.1-201ENST00000443970 75 ntBASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 RPS27P1-201ENST00000450552 247 ntBASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 AL691482.1-201ENST00000453255 87 ntBASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 RNU6-625P-201ENST00000459412 107 ntBASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 RN7SL303P-201ENST00000469773 251 ntBASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 RNA5SP249-201ENST00000516127 99 ntBASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 RNU6-927P-201ENST00000516199 100 ntBASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 AC114781.5-201ENST00000615297 108 ntBASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 AL353743.1-202ENST00000431724 1695 ntBASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 AL136164.4-201ENST00000625013 2135 ntBASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CTC1Q2NKJ3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 Y_RNA.329-201ENST00000365209 107 ntBASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 Y_RNA.393-201ENST00000383936 102 ntBASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 U8.10-201ENST00000384260 133 ntBASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 MT-TT-201ENST00000387460 66 ntBASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 SNORA75.5-201ENST00000391291 81 ntBASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 RNU6-554P-201ENST00000410466 106 ntBASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 Z82209.1-201ENST00000422141 2135 ntBASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 AL356387.2-201ENST00000422272 243 ntBASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 RPS12P10-201ENST00000427031 377 ntBASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 SNORA84-201ENST00000459229 133 ntBASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 AC108751.2-201ENST00000469993 231 ntBASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 AC010265.1-201ENST00000513509 211 ntBASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 AC015795.1-201ENST00000513669 327 ntBASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 SNORA31.22-201ENST00000517204 135 ntBASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 AL121603.1-201ENST00000553815 142 ntBASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 AC099669.2-201ENST00000616549 437 ntBASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 AC013791.1-201ENST00000616619 62 ntBASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 AL445567.2-201ENST00000618935 498 ntBASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 AC008079.2-201ENST00000623543 20396 ntBASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 OR51H2P-202ENST00000641424 3046 ntBASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CTC1Q2NKJ3 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5□□□□□ -1.61
CTC1Q2NKJ3 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CTC1Q2NKJ3 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5□□□□□ -1.61
CTC1Q2NKJ3 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5□□□□□ -1.61
CTC1Q2NKJ3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC5□□□□□ -1.61
CTC1Q2NKJ3 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms