Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 RNA5SP90-201ENST00000364801 99 ntBASIC5.28□□□□□ -1.56
RNF40O75150 RNU6-32P-201ENST00000383948 107 ntBASIC5.28□□□□□ -1.56
RNF40O75150 RNU6-13P-201ENST00000384248 107 ntBASIC5.28□□□□□ -1.56
RNF40O75150 RNU6-12P-201ENST00000384604 107 ntBASIC5.28□□□□□ -1.56
RNF40O75150 RNU6-41P-201ENST00000384741 107 ntBASIC5.28□□□□□ -1.56
RNF40O75150 MIR192-201ENST00000384915 110 ntBASIC5.28□□□□□ -1.56
RNF40O75150 AC007215.1-201ENST00000464893 276 ntBASIC5.28□□□□□ -1.56
RNF40O75150 RPL23AP14-201ENST00000468281 468 ntBASIC5.28□□□□□ -1.56
RNF40O75150 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC5.28□□□□□ -1.56
RNF40O75150 MIR3121-201ENST00000579680 77 ntBASIC5.28□□□□□ -1.56
RNF40O75150 AL670379.3-201ENST00000605040 251 ntBASIC5.28□□□□□ -1.56
RNF40O75150 MIR378J-201ENST00000611988 109 ntBASIC5.28□□□□□ -1.56
RNF40O75150 U6.99-201ENST00000637524 83 ntBASIC5.28□□□□□ -1.56
RNF40O75150 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RNF40O75150 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF40O75150 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF40O75150 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF40O75150 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.28□□□□□ -1.56
RNF40O75150 AL672167.1-203ENST00000641299 2975 ntBASIC5.28□□□□□ -1.56
RNF40O75150 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.28□□□□□ -1.56
RNF40O75150 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF40O75150 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RNF40O75150 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.27□□□□□ -1.57
RNF40O75150 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RNF40O75150 Y_RNA.116-201ENST00000363292 103 ntBASIC5.27□□□□□ -1.57
RNF40O75150 MIR153-1-201ENST00000384914 90 ntBASIC5.27□□□□□ -1.57
RNF40O75150 MT-TT-201ENST00000387460 66 ntBASIC5.27□□□□□ -1.57
RNF40O75150 RPL27AP8-201ENST00000424277 446 ntBASIC5.27□□□□□ -1.57
RNF40O75150 CKS1BP6-201ENST00000424932 240 ntBASIC5.27□□□□□ -1.57
RNF40O75150 SNRPEP9-201ENST00000436794 238 ntBASIC5.27□□□□□ -1.57
RNF40O75150 RPL34P20-201ENST00000442771 351 ntBASIC5.27□□□□□ -1.57
RNF40O75150 RPS27P1-201ENST00000450552 247 ntBASIC5.27□□□□□ -1.57
RNF40O75150 EIF4A1P11-201ENST00000451239 222 ntBASIC5.27□□□□□ -1.57
RNF40O75150 AURKAPS2-201ENST00000454983 333 ntBASIC5.27□□□□□ -1.57
RNF40O75150 AC140172.1-201ENST00000502928 141 ntBASIC5.27□□□□□ -1.57
RNF40O75150 MIR5688-201ENST00000580619 83 ntBASIC5.27□□□□□ -1.57
RNF40O75150 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
RNF40O75150 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF40O75150 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
RNF40O75150 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF40O75150 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF40O75150 SCN1A-220ENST00000641603 12506 ntBASIC5.27□□□□□ -1.57
RNF40O75150 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
RNF40O75150 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RNF40O75150 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
RNF40O75150 RNU6-245P-201ENST00000384020 107 ntBASIC5.26□□□□□ -1.57
RNF40O75150 AL592291.1-201ENST00000403830 352 ntBASIC5.26□□□□□ -1.57
RNF40O75150 AL160275.2-201ENST00000412010 394 ntBASIC5.26□□□□□ -1.57
RNF40O75150 RPS20P14-201ENST00000412545 360 ntBASIC5.26□□□□□ -1.57
RNF40O75150 AL590139.1-201ENST00000416267 400 ntBASIC5.26□□□□□ -1.57
RNF40O75150 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC5.26□□□□□ -1.57
RNF40O75150 RPS23P7-201ENST00000466210 444 ntBASIC5.26□□□□□ -1.57
RNF40O75150 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RNF40O75150 AC021231.3-201ENST00000558497 370 ntBASIC5.26□□□□□ -1.57
RNF40O75150 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC5.26□□□□□ -1.57
RNF40O75150 AC006380.1-201ENST00000603598 186 ntBASIC5.26□□□□□ -1.57
RNF40O75150 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RNF40O75150 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.26□□□□□ -1.57
RNF40O75150 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNF40O75150 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF40O75150 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF40O75150 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF40O75150 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RNF40O75150 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF40O75150 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF40O75150 Y_RNA.35-201ENST00000362601 101 ntBASIC5.25□□□□□ -1.57
RNF40O75150 Y_RNA.229-201ENST00000364347 113 ntBASIC5.25□□□□□ -1.57
RNF40O75150 SNORD73B-201ENST00000364394 72 ntBASIC5.25□□□□□ -1.57
RNF40O75150 RNU6-1164P-201ENST00000364428 107 ntBASIC5.25□□□□□ -1.57
RNF40O75150 RNA5SP428-201ENST00000365129 132 ntBASIC5.25□□□□□ -1.57
RNF40O75150 SNORD96B-201ENST00000386148 79 ntBASIC5.25□□□□□ -1.57
RNF40O75150 RNU4-43P-201ENST00000410628 137 ntBASIC5.25□□□□□ -1.57
RNF40O75150 Y_RNA.630-201ENST00000411370 108 ntBASIC5.25□□□□□ -1.57
RNF40O75150 RN7SL459P-201ENST00000481078 302 ntBASIC5.25□□□□□ -1.57
RNF40O75150 RN7SL244P-201ENST00000493405 297 ntBASIC5.25□□□□□ -1.57
RNF40O75150 AL161713.1-201ENST00000555538 145 ntBASIC5.25□□□□□ -1.57
RNF40O75150 RN7SL176P-201ENST00000580352 264 ntBASIC5.25□□□□□ -1.57
RNF40O75150 MIR4270-201ENST00000581799 70 ntBASIC5.25□□□□□ -1.57
RNF40O75150 AC019159.1-201ENST00000605094 187 ntBASIC5.25□□□□□ -1.57
RNF40O75150 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.25□□□□□ -1.57
RNF40O75150 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.25□□□□□ -1.57
RNF40O75150 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.25□□□□□ -1.57
RNF40O75150 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF40O75150 AC000123.3-201ENST00000624029 4975 ntBASIC5.25□□□□□ -1.57
RNF40O75150 AC107027.3-201ENST00000565095 3473 ntBASIC5.24□□□□□ -1.57
RNF40O75150 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNF40O75150 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RNF40O75150 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNF40O75150 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RNF40O75150 AC107068.1-201ENST00000563286 4218 ntBASIC5.24□□□□□ -1.57
RNF40O75150 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNF40O75150 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.24□□□□□ -1.57
RNF40O75150 AC092268.1-201ENST00000342691 405 ntBASIC5.24□□□□□ -1.57
RNF40O75150 SNORD56.1-201ENST00000362913 68 ntBASIC5.24□□□□□ -1.57
RNF40O75150 SNORD115-30-201ENST00000364117 82 ntBASIC5.24□□□□□ -1.57
RNF40O75150 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RNF40O75150 RNU6-1228P-201ENST00000391014 107 ntBASIC5.24□□□□□ -1.57
RNF40O75150 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.24□□□□□ -1.57
RNF40O75150 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC5.24□□□□□ -1.57
RNF40O75150 AL714022.1-201ENST00000439897 151 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms