Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM47Q96LD4 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
TRIM47Q96LD4 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
TRIM47Q96LD4 PHKBP1-201ENST00000450951 1951 ntBASIC5.18□□□□□ -1.58
TRIM47Q96LD4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
TRIM47Q96LD4 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM47Q96LD4 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM47Q96LD4 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM47Q96LD4 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM47Q96LD4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TRIM47Q96LD4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM47Q96LD4 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM47Q96LD4 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM47Q96LD4 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM47Q96LD4 RNU6-227P-201ENST00000362865 103 ntBASIC5.18□□□□□ -1.58
TRIM47Q96LD4 RNU6-968P-201ENST00000384076 107 ntBASIC5.18□□□□□ -1.58
TRIM47Q96LD4 Y_RNA.534-201ENST00000384599 112 ntBASIC5.18□□□□□ -1.58
TRIM47Q96LD4 SNORA40.5-201ENST00000391061 128 ntBASIC5.18□□□□□ -1.58
TRIM47Q96LD4 RNU6-381P-201ENST00000391259 108 ntBASIC5.18□□□□□ -1.58
TRIM47Q96LD4 SNORA68.2-201ENST00000391263 128 ntBASIC5.18□□□□□ -1.58
TRIM47Q96LD4 PTMAP2-201ENST00000397627 327 ntBASIC5.18□□□□□ -1.58
TRIM47Q96LD4 EIF4A1P3-201ENST00000411521 244 ntBASIC5.18□□□□□ -1.58
TRIM47Q96LD4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM47Q96LD4 AL132838.2-201ENST00000492041 314 ntBASIC5.18□□□□□ -1.58
TRIM47Q96LD4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM47Q96LD4 AK3P2-201ENST00000507976 429 ntBASIC5.18□□□□□ -1.58
TRIM47Q96LD4 RN7SKP258-201ENST00000517151 304 ntBASIC5.18□□□□□ -1.58
TRIM47Q96LD4 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM47Q96LD4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.18□□□□□ -1.58
TRIM47Q96LD4 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM47Q96LD4 LARP7P3-201ENST00000579888 337 ntBASIC5.18□□□□□ -1.58
TRIM47Q96LD4 AC233702.9-201ENST00000581528 203 ntBASIC5.18□□□□□ -1.58
TRIM47Q96LD4 MIR4744-201ENST00000581563 82 ntBASIC5.18□□□□□ -1.58
TRIM47Q96LD4 AC010928.2-201ENST00000588017 287 ntBASIC5.18□□□□□ -1.58
TRIM47Q96LD4 AC123786.2-201ENST00000603459 275 ntBASIC5.18□□□□□ -1.58
TRIM47Q96LD4 AL596211.1-201ENST00000569873 2277 ntBASIC5.18□□□□□ -1.58
TRIM47Q96LD4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM47Q96LD4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM47Q96LD4 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM47Q96LD4 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM47Q96LD4 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM47Q96LD4 AL450326.2-201ENST00000421913 1962 ntBASIC5.17□□□□□ -1.58
TRIM47Q96LD4 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
TRIM47Q96LD4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM47Q96LD4 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM47Q96LD4 RNVU1-3-201ENST00000364313 161 ntBASIC5.17□□□□□ -1.58
TRIM47Q96LD4 RNU6-245P-201ENST00000384020 107 ntBASIC5.17□□□□□ -1.58
TRIM47Q96LD4 RNA5SP372-201ENST00000390836 115 ntBASIC5.17□□□□□ -1.58
TRIM47Q96LD4 AL117339.2-201ENST00000430475 180 ntBASIC5.17□□□□□ -1.58
TRIM47Q96LD4 COX6B1P7-201ENST00000430845 235 ntBASIC5.17□□□□□ -1.58
TRIM47Q96LD4 AL031737.1-201ENST00000450125 223 ntBASIC5.17□□□□□ -1.58
TRIM47Q96LD4 AC022493.1-201ENST00000492984 337 ntBASIC5.17□□□□□ -1.58
TRIM47Q96LD4 RFPL4AP5-201ENST00000514977 504 ntBASIC5.17□□□□□ -1.58
TRIM47Q96LD4 CR383656.7-201ENST00000548164 174 ntBASIC5.17□□□□□ -1.58
TRIM47Q96LD4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM47Q96LD4 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM47Q96LD4 MIR4286-201ENST00000580651 93 ntBASIC5.17□□□□□ -1.58
TRIM47Q96LD4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM47Q96LD4 AC005086.4-201ENST00000623065 213 ntBASIC5.17□□□□□ -1.58
TRIM47Q96LD4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM47Q96LD4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM47Q96LD4 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM47Q96LD4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM47Q96LD4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM47Q96LD4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM47Q96LD4 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
TRIM47Q96LD4 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.16□□□□□ -1.58
TRIM47Q96LD4 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM47Q96LD4 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM47Q96LD4 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM47Q96LD4 RNU6-235P-201ENST00000362644 107 ntBASIC5.16□□□□□ -1.58
TRIM47Q96LD4 RNA5SP197-201ENST00000363357 119 ntBASIC5.16□□□□□ -1.58
TRIM47Q96LD4 RNA5SP391-201ENST00000363456 119 ntBASIC5.16□□□□□ -1.58
TRIM47Q96LD4 RNA5SP387-201ENST00000364226 106 ntBASIC5.16□□□□□ -1.58
TRIM47Q96LD4 SNORA25.7-201ENST00000364375 127 ntBASIC5.16□□□□□ -1.58
TRIM47Q96LD4 UBA52P6-201ENST00000399822 382 ntBASIC5.16□□□□□ -1.58
TRIM47Q96LD4 CYCSP19-201ENST00000411715 316 ntBASIC5.16□□□□□ -1.58
TRIM47Q96LD4 AC009237.10-201ENST00000414112 510 ntBASIC5.16□□□□□ -1.58
TRIM47Q96LD4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM47Q96LD4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
TRIM47Q96LD4 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
TRIM47Q96LD4 AC009296.1-201ENST00000443146 155 ntBASIC5.16□□□□□ -1.58
TRIM47Q96LD4 snoU13.7-201ENST00000459220 104 ntBASIC5.16□□□□□ -1.58
TRIM47Q96LD4 SNORD33.1-201ENST00000516213 88 ntBASIC5.16□□□□□ -1.58
TRIM47Q96LD4 RN7SKP49-201ENST00000516675 260 ntBASIC5.16□□□□□ -1.58
TRIM47Q96LD4 AC100767.1-201ENST00000528178 123 ntBASIC5.16□□□□□ -1.58
TRIM47Q96LD4 AC107918.3-201ENST00000533272 382 ntBASIC5.16□□□□□ -1.58
TRIM47Q96LD4 MIR3944-201ENST00000581277 108 ntBASIC5.16□□□□□ -1.58
TRIM47Q96LD4 AC113403.1-201ENST00000604910 193 ntBASIC5.16□□□□□ -1.58
TRIM47Q96LD4 MIR6867-201ENST00000610636 67 ntBASIC5.16□□□□□ -1.58
TRIM47Q96LD4 AL354798.1-201ENST00000622505 329 ntBASIC5.16□□□□□ -1.58
TRIM47Q96LD4 MIR1245B-201ENST00000636115 69 ntBASIC5.16□□□□□ -1.58
TRIM47Q96LD4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM47Q96LD4 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM47Q96LD4 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM47Q96LD4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
TRIM47Q96LD4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
TRIM47Q96LD4 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
TRIM47Q96LD4 NEAT1-202ENST00000501122 22743 ntBASIC5.15□□□□□ -1.58
TRIM47Q96LD4 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms