Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 MIR4658-201ENST00000584344 65 ntBASIC2.44□□□□□ -2.02
SNRNP40Q96DI7 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.44□□□□□ -2.02
SNRNP40Q96DI7 AC008945.2-201ENST00000606056 604 ntBASIC2.44□□□□□ -2.02
SNRNP40Q96DI7 HMGB1P24-202ENST00000615653 685 ntBASIC2.44□□□□□ -2.02
SNRNP40Q96DI7 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.44□□□□□ -2.02
SNRNP40Q96DI7 AC026585.1-201ENST00000619582 524 ntBASIC2.44□□□□□ -2.02
SNRNP40Q96DI7 AC011155.2-201ENST00000623202 216 ntBASIC2.44□□□□□ -2.02
SNRNP40Q96DI7 AC138627.2-201ENST00000624202 601 ntBASIC2.44□□□□□ -2.02
SNRNP40Q96DI7 AC009161.2-201ENST00000624626 138 ntBASIC2.44□□□□□ -2.02
SNRNP40Q96DI7 MIR3529-201ENST00000637713 78 ntBASIC2.44□□□□□ -2.02
SNRNP40Q96DI7 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.44□□□□□ -2.02
SNRNP40Q96DI7 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.44□□□□□ -2.02
SNRNP40Q96DI7 HSPA8P4-201ENST00000511877 1920 ntBASIC2.44□□□□□ -2.02
SNRNP40Q96DI7 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 SNORD114-19-201ENST00000363072 75 ntBASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 RNU6-550P-201ENST00000391057 101 ntBASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 DEFB108C-201ENST00000400154 252 ntBASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 CIR1P3-201ENST00000405137 479 ntBASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 RAP1BP3-201ENST00000407180 549 ntBASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 EEF1A1P40-201ENST00000412883 573 ntBASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 AL353621.1-201ENST00000418219 243 ntBASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 AC093151.1-201ENST00000427711 313 ntBASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 AL162395.1-201ENST00000457882 422 ntBASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 TPT1P7-201ENST00000458300 517 ntBASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 AC079382.1-201ENST00000493346 557 ntBASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 AC098799.2-201ENST00000509466 868 ntBASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 RN7SKP298-201ENST00000515950 94 ntBASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 RN7SKP43-201ENST00000516173 320 ntBASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 MIR892C-201ENST00000516410 77 ntBASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 MTCO2P4-201ENST00000517968 247 ntBASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 RPL7P20-201ENST00000520308 745 ntBASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 BNIP3P30-201ENST00000601184 574 ntBASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 uc_338.11-201ENST00000619132 160 ntBASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 CR381653.2-201ENST00000624041 768 ntBASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SNRNP40Q96DI7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 OR4G2P-201ENST00000328113 903 ntBASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 RNU6-371P-201ENST00000364283 108 ntBASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 RNU4-24P-201ENST00000364565 139 ntBASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 RNU6-1029P-201ENST00000384109 107 ntBASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 RNU6-1119P-201ENST00000384349 108 ntBASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 MIR504-201ENST00000385065 83 ntBASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 SNORA3.2-201ENST00000408221 125 ntBASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 RNU2-9P-201ENST00000410194 145 ntBASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 RNU2-63P-201ENST00000410792 194 ntBASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 BTF3L4P1-201ENST00000413813 468 ntBASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 CYCSP48-201ENST00000417124 323 ntBASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 AC009963.1-201ENST00000417265 157 ntBASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 AL596276.1-201ENST00000434465 418 ntBASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 AL360271.2-201ENST00000447710 161 ntBASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 AC140059.1-201ENST00000489238 361 ntBASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 SNORD27.1-201ENST00000516319 72 ntBASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 RNU6-1178P-201ENST00000516674 107 ntBASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 AC024909.2-201ENST00000553035 286 ntBASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 MIR4775-201ENST00000581168 75 ntBASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 MIR5194-201ENST00000582634 120 ntBASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 MIR3611-201ENST00000584484 83 ntBASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 AC244517.12-201ENST00000623581 663 ntBASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 AC084035.1-201ENST00000634543 607 ntBASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
SNRNP40Q96DI7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 ZNF658B-202ENST00000615961 3375 ntBASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 MIR26A1-201ENST00000362205 77 ntBASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 Y_RNA.359-201ENST00000365498 102 ntBASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 RPS4XP7-201ENST00000406274 780 ntBASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 RNU4-46P-201ENST00000410818 138 ntBASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 RNA5SP344-201ENST00000411081 104 ntBASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 UBE2V1P10-201ENST00000414685 269 ntBASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 AL031779.1-201ENST00000415663 330 ntBASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 RPS3AP44-201ENST00000425466 790 ntBASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 SUMO1P4-201ENST00000429430 302 ntBASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 AC000111.3-201ENST00000433478 193 ntBASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 AC112220.1-201ENST00000434628 355 ntBASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 AC073901.1-201ENST00000462471 408 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms