Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.36□□□□□ -1.71
PDGFAP04085 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDGFAP04085 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDGFAP04085 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.35□□□□□ -1.71
PDGFAP04085 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.35□□□□□ -1.71
PDGFAP04085 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.35□□□□□ -1.71
PDGFAP04085 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.35□□□□□ -1.71
PDGFAP04085 RNA5SP388-201ENST00000362584 119 ntBASIC4.35□□□□□ -1.71
PDGFAP04085 RNU6-740P-201ENST00000364734 105 ntBASIC4.35□□□□□ -1.71
PDGFAP04085 RNU6-487P-201ENST00000365430 104 ntBASIC4.35□□□□□ -1.71
PDGFAP04085 SNORA36A-201ENST00000384221 132 ntBASIC4.35□□□□□ -1.71
PDGFAP04085 RNU6-662P-201ENST00000384253 104 ntBASIC4.35□□□□□ -1.71
PDGFAP04085 SNORA37-201ENST00000384504 129 ntBASIC4.35□□□□□ -1.71
PDGFAP04085 SNORD96B-201ENST00000386148 79 ntBASIC4.35□□□□□ -1.71
PDGFAP04085 Y_RNA.626-201ENST00000411288 95 ntBASIC4.35□□□□□ -1.71
PDGFAP04085 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.35□□□□□ -1.71
PDGFAP04085 RPS26P2-201ENST00000440331 348 ntBASIC4.35□□□□□ -1.71
PDGFAP04085 RPL39P29-201ENST00000447779 157 ntBASIC4.35□□□□□ -1.71
PDGFAP04085 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.35□□□□□ -1.71
PDGFAP04085 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.35□□□□□ -1.71
PDGFAP04085 SNORA40.9-201ENST00000515895 93 ntBASIC4.35□□□□□ -1.71
PDGFAP04085 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.35□□□□□ -1.71
PDGFAP04085 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.35□□□□□ -1.71
PDGFAP04085 AL391261.3-201ENST00000557194 520 ntBASIC4.35□□□□□ -1.71
PDGFAP04085 AC093249.4-201ENST00000564755 259 ntBASIC4.35□□□□□ -1.71
PDGFAP04085 MTND6P33-201ENST00000571794 183 ntBASIC4.35□□□□□ -1.71
PDGFAP04085 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.35□□□□□ -1.71
PDGFAP04085 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.35□□□□□ -1.71
PDGFAP04085 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PDGFAP04085 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.35□□□□□ -1.71
PDGFAP04085 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDGFAP04085 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDGFAP04085 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDGFAP04085 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDGFAP04085 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PDGFAP04085 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.34□□□□□ -1.71
PDGFAP04085 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDGFAP04085 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDGFAP04085 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PDGFAP04085 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.71
PDGFAP04085 MIR487A-201ENST00000385009 80 ntBASIC4.34□□□□□ -1.71
PDGFAP04085 SNORA57.1-201ENST00000391227 145 ntBASIC4.34□□□□□ -1.71
PDGFAP04085 RPS26P42-201ENST00000413485 326 ntBASIC4.34□□□□□ -1.71
PDGFAP04085 AC140479.3-201ENST00000418944 1126 ntBASIC4.34□□□□□ -1.71
PDGFAP04085 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.34□□□□□ -1.71
PDGFAP04085 MTCO1P5-201ENST00000433573 344 ntBASIC4.34□□□□□ -1.71
PDGFAP04085 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.34□□□□□ -1.71
PDGFAP04085 AC079168.2-201ENST00000453977 416 ntBASIC4.34□□□□□ -1.71
PDGFAP04085 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.34□□□□□ -1.71
PDGFAP04085 snoU13.6-201ENST00000458785 104 ntBASIC4.34□□□□□ -1.71
PDGFAP04085 RNA5SP310-201ENST00000459084 116 ntBASIC4.34□□□□□ -1.71
PDGFAP04085 SCARNA10-201ENST00000459255 330 ntBASIC4.34□□□□□ -1.71
PDGFAP04085 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.34□□□□□ -1.71
PDGFAP04085 RPS4XP13-201ENST00000483219 789 ntBASIC4.34□□□□□ -1.71
PDGFAP04085 AP001025.1-201ENST00000486139 332 ntBASIC4.34□□□□□ -1.71
PDGFAP04085 AC006445.2-201ENST00000510061 472 ntBASIC4.34□□□□□ -1.71
PDGFAP04085 RNU1-61P-201ENST00000516107 151 ntBASIC4.34□□□□□ -1.71
PDGFAP04085 RNU1-6P-201ENST00000516290 144 ntBASIC4.34□□□□□ -1.71
PDGFAP04085 HIGD1AP1-201ENST00000550979 275 ntBASIC4.34□□□□□ -1.71
PDGFAP04085 MIR3138-201ENST00000585238 82 ntBASIC4.34□□□□□ -1.71
PDGFAP04085 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.34□□□□□ -1.71
PDGFAP04085 MIR3199-2-201ENST00000636243 86 ntBASIC4.34□□□□□ -1.71
PDGFAP04085 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
PDGFAP04085 AC107068.1-201ENST00000563286 4218 ntBASIC4.34□□□□□ -1.71
PDGFAP04085 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.34□□□□□ -1.71
PDGFAP04085 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.34□□□□□ -1.71
PDGFAP04085 AC073073.2-201ENST00000609827 2578 ntBASIC4.34□□□□□ -1.72
PDGFAP04085 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PDGFAP04085 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PDGFAP04085 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PDGFAP04085 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
PDGFAP04085 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.33□□□□□ -1.72
PDGFAP04085 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDGFAP04085 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDGFAP04085 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDGFAP04085 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PDGFAP04085 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.33□□□□□ -1.72
PDGFAP04085 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.33□□□□□ -1.72
PDGFAP04085 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
PDGFAP04085 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.33□□□□□ -1.72
PDGFAP04085 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDGFAP04085 RNU6-270P-201ENST00000364131 105 ntBASIC4.33□□□□□ -1.72
PDGFAP04085 Y_RNA.275-201ENST00000364726 110 ntBASIC4.33□□□□□ -1.72
PDGFAP04085 RNU6-1175P-201ENST00000365200 107 ntBASIC4.33□□□□□ -1.72
PDGFAP04085 SNORA46.1-201ENST00000391069 153 ntBASIC4.33□□□□□ -1.72
PDGFAP04085 SNORA26.3-201ENST00000391119 136 ntBASIC4.33□□□□□ -1.72
PDGFAP04085 RPL23AP48-201ENST00000406913 488 ntBASIC4.33□□□□□ -1.72
PDGFAP04085 Y_RNA.590-201ENST00000410140 107 ntBASIC4.33□□□□□ -1.72
PDGFAP04085 Y_RNA.595-201ENST00000410403 105 ntBASIC4.33□□□□□ -1.72
PDGFAP04085 RN7SKP53-201ENST00000411337 315 ntBASIC4.33□□□□□ -1.72
PDGFAP04085 AC012306.1-201ENST00000423267 114 ntBASIC4.33□□□□□ -1.72
PDGFAP04085 AC073073.1-201ENST00000493920 463 ntBASIC4.33□□□□□ -1.72
PDGFAP04085 RN7SL558P-201ENST00000497468 299 ntBASIC4.33□□□□□ -1.72
PDGFAP04085 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.33□□□□□ -1.72
PDGFAP04085 AC107393.1-201ENST00000512403 346 ntBASIC4.33□□□□□ -1.72
PDGFAP04085 Y_RNA.679-201ENST00000516416 91 ntBASIC4.33□□□□□ -1.72
PDGFAP04085 ACA59.2-201ENST00000517061 156 ntBASIC4.33□□□□□ -1.72
PDGFAP04085 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.33□□□□□ -1.72
PDGFAP04085 AC006199.1-201ENST00000548728 219 ntBASIC4.33□□□□□ -1.72
PDGFAP04085 AC007224.1-201ENST00000564410 144 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms