Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 FAM35CP-201ENST00000554755 2470 ntBASIC2.66□□□□□ -1.98
VTNP04004 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.66□□□□□ -1.98
VTNP04004 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.66□□□□□ -1.98
VTNP04004 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
VTNP04004 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
VTNP04004 RNU6-884P-201ENST00000363889 107 ntBASIC2.65□□□□□ -1.99
VTNP04004 Y_RNA.255-201ENST00000364581 97 ntBASIC2.65□□□□□ -1.99
VTNP04004 Y_RNA.450-201ENST00000384198 113 ntBASIC2.65□□□□□ -1.99
VTNP04004 MIR301A-201ENST00000385261 86 ntBASIC2.65□□□□□ -1.99
VTNP04004 AL162578.1-201ENST00000406202 378 ntBASIC2.65□□□□□ -1.99
VTNP04004 RPL7P10-201ENST00000417407 739 ntBASIC2.65□□□□□ -1.99
VTNP04004 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.65□□□□□ -1.99
VTNP04004 ATG3P1-201ENST00000419507 911 ntBASIC2.65□□□□□ -1.99
VTNP04004 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.65□□□□□ -1.99
VTNP04004 USP9YP18-201ENST00000425912 695 ntBASIC2.65□□□□□ -1.99
VTNP04004 AL365496.1-201ENST00000426885 215 ntBASIC2.65□□□□□ -1.99
VTNP04004 SAR1AP4-201ENST00000429225 591 ntBASIC2.65□□□□□ -1.99
VTNP04004 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.65□□□□□ -1.99
VTNP04004 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.65□□□□□ -1.99
VTNP04004 AL139415.2-201ENST00000431968 163 ntBASIC2.65□□□□□ -1.99
VTNP04004 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.65□□□□□ -1.99
VTNP04004 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.65□□□□□ -1.99
VTNP04004 GSTA11P-201ENST00000452866 669 ntBASIC2.65□□□□□ -1.99
VTNP04004 FABP5P15-201ENST00000453566 214 ntBASIC2.65□□□□□ -1.99
VTNP04004 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.65□□□□□ -1.99
VTNP04004 AC133134.1-201ENST00000466800 359 ntBASIC2.65□□□□□ -1.99
VTNP04004 GMFBP1-201ENST00000467831 427 ntBASIC2.65□□□□□ -1.99
VTNP04004 AC083798.1-201ENST00000472671 131 ntBASIC2.65□□□□□ -1.99
VTNP04004 AC109927.2-201ENST00000506416 303 ntBASIC2.65□□□□□ -1.99
VTNP04004 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VTNP04004 SNORA40.12-201ENST00000516329 111 ntBASIC2.65□□□□□ -1.99
VTNP04004 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.65□□□□□ -1.99
VTNP04004 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.65□□□□□ -1.99
VTNP04004 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.65□□□□□ -1.99
VTNP04004 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.65□□□□□ -1.99
VTNP04004 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.65□□□□□ -1.99
VTNP04004 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.65□□□□□ -1.99
VTNP04004 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.65□□□□□ -1.99
VTNP04004 MTND4LP5-201ENST00000605152 292 ntBASIC2.65□□□□□ -1.99
VTNP04004 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.65□□□□□ -1.99
VTNP04004 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
VTNP04004 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.65□□□□□ -1.99
VTNP04004 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.65□□□□□ -1.99
VTNP04004 MTND4P35-201ENST00000604257 1375 ntBASIC2.64□□□□□ -1.99
VTNP04004 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VTNP04004 Y_RNA.38-201ENST00000362617 102 ntBASIC2.64□□□□□ -1.99
VTNP04004 U8.2-201ENST00000363156 134 ntBASIC2.64□□□□□ -1.99
VTNP04004 RNU1-105P-201ENST00000363470 161 ntBASIC2.64□□□□□ -1.99
VTNP04004 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.64□□□□□ -1.99
VTNP04004 MIR592-201ENST00000384959 97 ntBASIC2.64□□□□□ -1.99
VTNP04004 RNA5SP354-201ENST00000391247 136 ntBASIC2.64□□□□□ -1.99
VTNP04004 RNU6-903P-201ENST00000391270 109 ntBASIC2.64□□□□□ -1.99
VTNP04004 SNORA26.7-201ENST00000391288 122 ntBASIC2.64□□□□□ -1.99
VTNP04004 RNU2-29P-201ENST00000410423 189 ntBASIC2.64□□□□□ -1.99
VTNP04004 HMGN2P30-201ENST00000423237 256 ntBASIC2.64□□□□□ -1.99
VTNP04004 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.64□□□□□ -1.99
VTNP04004 GTF2IP20-201ENST00000431663 360 ntBASIC2.64□□□□□ -1.99
VTNP04004 USP9YP28-201ENST00000435142 589 ntBASIC2.64□□□□□ -1.99
VTNP04004 RPL23AP58-201ENST00000440453 469 ntBASIC2.64□□□□□ -1.99
VTNP04004 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.64□□□□□ -1.99
VTNP04004 RPL39P40-201ENST00000445481 146 ntBASIC2.64□□□□□ -1.99
VTNP04004 AC104058.1-201ENST00000448028 297 ntBASIC2.64□□□□□ -1.99
VTNP04004 AC073415.1-201ENST00000449240 153 ntBASIC2.64□□□□□ -1.99
VTNP04004 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.64□□□□□ -1.99
VTNP04004 SNRPFP3-201ENST00000457792 225 ntBASIC2.64□□□□□ -1.99
VTNP04004 EIF4EP3-201ENST00000498782 656 ntBASIC2.64□□□□□ -1.99
VTNP04004 RNA5SP281-201ENST00000516504 135 ntBASIC2.64□□□□□ -1.99
VTNP04004 RNU6-1178P-201ENST00000516674 107 ntBASIC2.64□□□□□ -1.99
VTNP04004 RN7SKP219-201ENST00000516825 296 ntBASIC2.64□□□□□ -1.99
VTNP04004 RNU6-685P-201ENST00000517088 95 ntBASIC2.64□□□□□ -1.99
VTNP04004 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.64□□□□□ -1.99
VTNP04004 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.64□□□□□ -1.99
VTNP04004 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
VTNP04004 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.64□□□□□ -1.99
VTNP04004 AC109635.3-201ENST00000529536 185 ntBASIC2.64□□□□□ -1.99
VTNP04004 OR5BN1P-201ENST00000532955 829 ntBASIC2.64□□□□□ -1.99
VTNP04004 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.64□□□□□ -1.99
VTNP04004 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.64□□□□□ -1.99
VTNP04004 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
VTNP04004 HMGN2P15-201ENST00000585707 270 ntBASIC2.64□□□□□ -1.99
VTNP04004 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.64□□□□□ -1.99
VTNP04004 AC023043.3-201ENST00000593113 385 ntBASIC2.64□□□□□ -1.99
VTNP04004 AP003465.2-201ENST00000602571 373 ntBASIC2.64□□□□□ -1.99
VTNP04004 AL162413.1-201ENST00000603198 110 ntBASIC2.64□□□□□ -1.99
VTNP04004 YWHAEP7-203ENST00000622054 312 ntBASIC2.64□□□□□ -1.99
VTNP04004 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.64□□□□□ -1.99
VTNP04004 MIR1291-201ENST00000627649 87 ntBASIC2.64□□□□□ -1.99
VTNP04004 MIR1321-201ENST00000637766 79 ntBASIC2.64□□□□□ -1.99
VTNP04004 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.64□□□□□ -1.99
VTNP04004 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.63□□□□□ -1.99
VTNP04004 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
VTNP04004 RNU6-552P-201ENST00000362869 119 ntBASIC2.63□□□□□ -1.99
VTNP04004 RNY4P14-201ENST00000363656 96 ntBASIC2.63□□□□□ -1.99
VTNP04004 Y_RNA.534-201ENST00000384599 112 ntBASIC2.63□□□□□ -1.99
VTNP04004 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
VTNP04004 AL139095.1-201ENST00000404326 391 ntBASIC2.63□□□□□ -1.99
VTNP04004 AL606923.1-201ENST00000406616 190 ntBASIC2.63□□□□□ -1.99
VTNP04004 RNU6-1025P-201ENST00000410629 104 ntBASIC2.63□□□□□ -1.99
VTNP04004 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.63□□□□□ -1.99
VTNP04004 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms