Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 AL021877.2-201ENST00000624442 10684 ntBASIC7.89□□□□□ -1.15
MSH5O43196 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC7.89□□□□□ -1.15
MSH5O43196 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
MSH5O43196 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
MSH5O43196 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
MSH5O43196 RNU1-49P-201ENST00000363468 159 ntBASIC7.89□□□□□ -1.15
MSH5O43196 RNA5SP132-201ENST00000364725 118 ntBASIC7.89□□□□□ -1.15
MSH5O43196 AC098976.1-201ENST00000513014 541 ntBASIC7.89□□□□□ -1.15
MSH5O43196 MTND6P33-201ENST00000571794 183 ntBASIC7.89□□□□□ -1.15
MSH5O43196 DLEU2_5.2-201ENST00000610606 84 ntBASIC7.89□□□□□ -1.15
MSH5O43196 MIR7159-201ENST00000620587 66 ntBASIC7.89□□□□□ -1.15
MSH5O43196 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
MSH5O43196 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
MSH5O43196 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
MSH5O43196 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
MSH5O43196 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC7.88□□□□□ -1.15
MSH5O43196 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC7.88□□□□□ -1.15
MSH5O43196 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
MSH5O43196 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC7.88□□□□□ -1.15
MSH5O43196 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
MSH5O43196 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
MSH5O43196 OR13C1P-202ENST00000641378 2919 ntBASIC7.88□□□□□ -1.15
MSH5O43196 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
MSH5O43196 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
MSH5O43196 MIR375-201ENST00000362103 64 ntBASIC7.88□□□□□ -1.15
MSH5O43196 RNU1-150P-201ENST00000362491 162 ntBASIC7.88□□□□□ -1.15
MSH5O43196 SNORA51.8-201ENST00000384234 132 ntBASIC7.88□□□□□ -1.15
MSH5O43196 PVALB-202ENST00000404171 422 ntTSL 2 BASIC7.88□□□□□ -1.15
MSH5O43196 MIR1236-201ENST00000408340 102 ntBASIC7.88□□□□□ -1.15
MSH5O43196 HMGN2P9-201ENST00000476875 229 ntBASIC7.88□□□□□ -1.15
MSH5O43196 AL121603.1-201ENST00000553815 142 ntBASIC7.88□□□□□ -1.15
MSH5O43196 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC7.88□□□□□ -1.15
MSH5O43196 SNORD84-203ENST00000584275 78 ntBASIC7.88□□□□□ -1.15
MSH5O43196 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC7.88□□□□□ -1.15
MSH5O43196 AC091932.4-201ENST00000623386 200 ntBASIC7.88□□□□□ -1.15
MSH5O43196 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC7.88□□□□□ -1.15
MSH5O43196 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
MSH5O43196 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
MSH5O43196 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
MSH5O43196 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC7.88□□□□□ -1.15
MSH5O43196 MAPK10-328ENST00000641553 4009 ntBASIC7.87□□□□□ -1.15
MSH5O43196 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
MSH5O43196 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC7.87□□□□□ -1.15
MSH5O43196 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
MSH5O43196 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
MSH5O43196 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC7.87□□□□□ -1.15
MSH5O43196 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC7.87□□□□□ -1.15
MSH5O43196 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
MSH5O43196 RNU6-1244P-201ENST00000363614 108 ntBASIC7.87□□□□□ -1.15
MSH5O43196 Y_RNA.299-201ENST00000364973 94 ntBASIC7.87□□□□□ -1.15
MSH5O43196 AL022718.1-201ENST00000412004 84 ntBASIC7.87□□□□□ -1.15
MSH5O43196 OR2AT2P-201ENST00000413438 905 ntBASIC7.87□□□□□ -1.15
MSH5O43196 AC008065.1-201ENST00000428525 348 ntBASIC7.87□□□□□ -1.15
MSH5O43196 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC7.87□□□□□ -1.15
MSH5O43196 AC010343.2-201ENST00000510162 224 ntBASIC7.87□□□□□ -1.15
MSH5O43196 SNORA70.20-201ENST00000516848 126 ntBASIC7.87□□□□□ -1.15
MSH5O43196 Y_RNA.722-201ENST00000517279 114 ntBASIC7.87□□□□□ -1.15
MSH5O43196 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC7.87□□□□□ -1.15
MSH5O43196 MIR4505-201ENST00000582238 73 ntBASIC7.87□□□□□ -1.15
MSH5O43196 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
MSH5O43196 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
MSH5O43196 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
MSH5O43196 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
MSH5O43196 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
MSH5O43196 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
MSH5O43196 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.86□□□□□ -1.15
MSH5O43196 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
MSH5O43196 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC7.86□□□□□ -1.15
MSH5O43196 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.86□□□□□ -1.15
MSH5O43196 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC7.86□□□□□ -1.15
MSH5O43196 Y_RNA.351-201ENST00000365436 96 ntBASIC7.86□□□□□ -1.15
MSH5O43196 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC7.86□□□□□ -1.15
MSH5O43196 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
MSH5O43196 AC090602.1-201ENST00000469695 252 ntBASIC7.86□□□□□ -1.15
MSH5O43196 AL122020.1-201ENST00000472287 459 ntBASIC7.86□□□□□ -1.15
MSH5O43196 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC7.86□□□□□ -1.15
MSH5O43196 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC7.86□□□□□ -1.15
MSH5O43196 MIR3189-201ENST00000578735 73 ntBASIC7.86□□□□□ -1.15
MSH5O43196 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
MSH5O43196 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
MSH5O43196 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
MSH5O43196 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
MSH5O43196 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC7.86□□□□□ -1.15
MSH5O43196 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
MSH5O43196 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
MSH5O43196 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC7.85□□□□□ -1.15
MSH5O43196 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
MSH5O43196 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.85□□□□□ -1.15
MSH5O43196 AC074141.1-201ENST00000588129 2995 ntBASIC7.85□□□□□ -1.15
MSH5O43196 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
MSH5O43196 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
MSH5O43196 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
MSH5O43196 Y_RNA.140-201ENST00000363474 103 ntBASIC7.85□□□□□ -1.15
MSH5O43196 Y_RNA.236-201ENST00000364427 111 ntBASIC7.85□□□□□ -1.15
MSH5O43196 SNORA51.4-201ENST00000364993 124 ntBASIC7.85□□□□□ -1.15
MSH5O43196 SNORD115-31-201ENST00000365318 82 ntBASIC7.85□□□□□ -1.15
MSH5O43196 MIR34C-201ENST00000384831 77 ntBASIC7.85□□□□□ -1.15
MSH5O43196 MIR585-201ENST00000384887 94 ntBASIC7.85□□□□□ -1.15
MSH5O43196 GPS2P1-201ENST00000411761 986 ntBASIC7.85□□□□□ -1.15
MSH5O43196 DCLRE1CP1-201ENST00000454630 470 ntBASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms