Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.3□□□□□ -1.56
LRCH3Q96II8 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
LRCH3Q96II8 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
LRCH3Q96II8 Y_RNA.114-201ENST00000363265 113 ntBASIC5.3□□□□□ -1.56
LRCH3Q96II8 RNU6-727P-201ENST00000363592 107 ntBASIC5.3□□□□□ -1.56
LRCH3Q96II8 RNU6-454P-201ENST00000364292 107 ntBASIC5.3□□□□□ -1.56
LRCH3Q96II8 Y_RNA.348-201ENST00000365403 103 ntBASIC5.3□□□□□ -1.56
LRCH3Q96II8 SNORD56.6-201ENST00000384569 71 ntBASIC5.3□□□□□ -1.56
LRCH3Q96II8 RNU6-19P-201ENST00000384718 107 ntBASIC5.3□□□□□ -1.56
LRCH3Q96II8 PTMAP2-201ENST00000397627 327 ntBASIC5.3□□□□□ -1.56
LRCH3Q96II8 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC5.3□□□□□ -1.56
LRCH3Q96II8 CKS1BP5-201ENST00000434172 273 ntBASIC5.3□□□□□ -1.56
LRCH3Q96II8 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.3□□□□□ -1.56
LRCH3Q96II8 SCARNA22-201ENST00000503991 125 ntBASIC5.3□□□□□ -1.56
LRCH3Q96II8 AC022790.1-201ENST00000522872 204 ntBASIC5.3□□□□□ -1.56
LRCH3Q96II8 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC5.3□□□□□ -1.56
LRCH3Q96II8 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC5.3□□□□□ -1.56
LRCH3Q96II8 AC120024.3-201ENST00000603167 156 ntBASIC5.3□□□□□ -1.56
LRCH3Q96II8 AC108738.1-201ENST00000603703 237 ntBASIC5.3□□□□□ -1.56
LRCH3Q96II8 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC5.3□□□□□ -1.56
LRCH3Q96II8 AC073136.1-201ENST00000449426 2884 ntBASIC5.3□□□□□ -1.56
LRCH3Q96II8 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
LRCH3Q96II8 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRCH3Q96II8 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.3□□□□□ -1.56
LRCH3Q96II8 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRCH3Q96II8 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRCH3Q96II8 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRCH3Q96II8 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.29□□□□□ -1.56
LRCH3Q96II8 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
LRCH3Q96II8 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LRCH3Q96II8 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LRCH3Q96II8 AC025031.4-201ENST00000621248 3271 ntBASIC5.29□□□□□ -1.56
LRCH3Q96II8 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
LRCH3Q96II8 U8.1-201ENST00000362843 134 ntBASIC5.29□□□□□ -1.56
LRCH3Q96II8 SNORD56.1-201ENST00000362913 68 ntBASIC5.29□□□□□ -1.56
LRCH3Q96II8 RNU6-1205P-201ENST00000363625 106 ntBASIC5.29□□□□□ -1.56
LRCH3Q96II8 RNU6-597P-201ENST00000365620 102 ntBASIC5.29□□□□□ -1.56
LRCH3Q96II8 SNORA20B-201ENST00000384220 132 ntBASIC5.29□□□□□ -1.56
LRCH3Q96II8 MIR548A1-201ENST00000385041 97 ntBASIC5.29□□□□□ -1.56
LRCH3Q96II8 RPS26P42-201ENST00000413485 326 ntBASIC5.29□□□□□ -1.56
LRCH3Q96II8 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LRCH3Q96II8 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.29□□□□□ -1.56
LRCH3Q96II8 AC007969.2-201ENST00000441891 191 ntBASIC5.29□□□□□ -1.56
LRCH3Q96II8 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.29□□□□□ -1.56
LRCH3Q96II8 RN7SL443P-201ENST00000464331 290 ntBASIC5.29□□□□□ -1.56
LRCH3Q96II8 KC877373.1-201ENST00000479066 408 ntBASIC5.29□□□□□ -1.56
LRCH3Q96II8 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
LRCH3Q96II8 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC5.29□□□□□ -1.56
LRCH3Q96II8 MIR5688-201ENST00000580619 83 ntBASIC5.29□□□□□ -1.56
LRCH3Q96II8 MIR4512-201ENST00000583257 77 ntBASIC5.29□□□□□ -1.56
LRCH3Q96II8 IPO5P1-202ENST00000600039 287 ntBASIC5.29□□□□□ -1.56
LRCH3Q96II8 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LRCH3Q96II8 AC012468.1-201ENST00000604888 430 ntBASIC5.29□□□□□ -1.56
LRCH3Q96II8 AL023881.1-201ENST00000621088 301 ntBASIC5.29□□□□□ -1.56
LRCH3Q96II8 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LRCH3Q96II8 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.29□□□□□ -1.56
LRCH3Q96II8 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
LRCH3Q96II8 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
LRCH3Q96II8 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
LRCH3Q96II8 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LRCH3Q96II8 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
LRCH3Q96II8 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.29□□□□□ -1.56
LRCH3Q96II8 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LRCH3Q96II8 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC5.28□□□□□ -1.56
LRCH3Q96II8 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LRCH3Q96II8 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LRCH3Q96II8 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
LRCH3Q96II8 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.28□□□□□ -1.56
LRCH3Q96II8 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
LRCH3Q96II8 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LRCH3Q96II8 DEFB108F-201ENST00000344638 222 ntBASIC5.28□□□□□ -1.56
LRCH3Q96II8 SNORA63.1-201ENST00000362493 131 ntBASIC5.28□□□□□ -1.56
LRCH3Q96II8 SNORD114-19-201ENST00000363072 75 ntBASIC5.28□□□□□ -1.56
LRCH3Q96II8 RNU6-1131P-201ENST00000364955 107 ntBASIC5.28□□□□□ -1.56
LRCH3Q96II8 Z98749.2-208ENST00000381646 500 ntBASIC5.28□□□□□ -1.56
LRCH3Q96II8 SNORA9-201ENST00000384215 133 ntBASIC5.28□□□□□ -1.56
LRCH3Q96II8 RNU6-106P-201ENST00000384405 107 ntBASIC5.28□□□□□ -1.56
LRCH3Q96II8 RPL21P17-201ENST00000397467 475 ntBASIC5.28□□□□□ -1.56
LRCH3Q96II8 RNU4-43P-201ENST00000410628 137 ntBASIC5.28□□□□□ -1.56
LRCH3Q96II8 RNU6-628P-201ENST00000410675 107 ntBASIC5.28□□□□□ -1.56
LRCH3Q96II8 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.28□□□□□ -1.56
LRCH3Q96II8 RNA5SP392-201ENST00000516905 112 ntBASIC5.28□□□□□ -1.56
LRCH3Q96II8 RNA5SP230-201ENST00000517039 122 ntBASIC5.28□□□□□ -1.56
LRCH3Q96II8 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC5.28□□□□□ -1.56
LRCH3Q96II8 RN7SL290P-201ENST00000578661 300 ntBASIC5.28□□□□□ -1.56
LRCH3Q96II8 MIR4660-201ENST00000583549 74 ntBASIC5.28□□□□□ -1.56
LRCH3Q96II8 SNORD84-203ENST00000584275 78 ntBASIC5.28□□□□□ -1.56
LRCH3Q96II8 AC020895.1-201ENST00000595362 272 ntBASIC5.28□□□□□ -1.56
LRCH3Q96II8 FAM27B-201ENST00000610601 213 ntBASIC5.28□□□□□ -1.56
LRCH3Q96II8 AC244107.2-201ENST00000611773 76 ntBASIC5.28□□□□□ -1.56
LRCH3Q96II8 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC5.28□□□□□ -1.56
LRCH3Q96II8 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC5.28□□□□□ -1.56
LRCH3Q96II8 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LRCH3Q96II8 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.28□□□□□ -1.56
LRCH3Q96II8 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.28□□□□□ -1.56
LRCH3Q96II8 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LRCH3Q96II8 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LRCH3Q96II8 PHKBP1-201ENST00000450951 1951 ntBASIC5.27□□□□□ -1.57
LRCH3Q96II8 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
LRCH3Q96II8 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 158.5 ms